Gossypium hirsutum (upland cotton): 107893239
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Entry
107893239 CDS
T04793
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107893239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107893239
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
107893239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
Takusan
XLF
Motif
Other DBs
NCBI-GeneID:
107893239
NCBI-ProteinID:
XP_040959156
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All DBs
Position
D10:41787427..41790051
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AA seq
262 aa
AA seq
DB search
MESSSTTTARHTCLKLEIPSTDPLFVKGTWFDTHFHLSVTDGLRAWLCNATEEEVQERAA
QWDQPVAEYIELAERYLGFQQPGTVYRFVDAGDDHKRLSWTFEREGTKLEWRWKFQPSYD
SRKITAGILDFLMDANINLSVEEVVRKTQSFEKLKLEAEKCLEQSERFTNEKMEFESEIY
AKFLGVLNSKKAKLRELRDQLSKQEIAGKASVDEEESTDKTESYHSGSNAEESEEEAEKN
ITSSSKDIPAGRDRGRKRATRK
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcagctctacgacaacggcaagacatacttgccttaagcttgaaattccaagc
accgatcctctcttcgtgaaaggcacgtggttcgatactcacttccatctctccgtcacc
gatggcctccgcgcttggctctgcaacgcgacggaggaggaggtgcaggaaagagcggct
cagtgggatcagcccgtcgctgaatacattgaattagccgaacggtatttagggtttcaa
cagcccggtacagtctaccggttcgttgatgctggcgatgaccacaaaagactttcatgg
actttcgaaagagaaggaactaagcttgaatggcgatggaaattccagccgtcgtatgat
agccgaaagattacagcaggaattttggattttcttatggatgcaaacattaacctaagc
gtagaagaagtggttagaaaaactcaatcttttgagaagctcaaactggaagctgagaaa
tgtttagaacaaagtgagagatttaccaatgagaagatggaatttgaatcagaaatctat
gcaaagttccttggggtcttgaattcaaagaaggcaaaactcagggagcttcgagaccag
ctctcaaaacaggaaattgcaggaaaagcttcggtggatgaggaagaatctactgataaa
acagagagctaccatagtggaagtaatgctgaggaaagtgaagaagaagctgaaaagaac
atcacaagcagttcaaaagatattccagcaggcagagatcgtggtcgaaagagagctaca
cgcaagtaa
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