Gossypium hirsutum (upland cotton): 107897606
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Entry
107897606 CDS
T04793
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase Pin1
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107897606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107897606
03110 Chaperones and folding catalysts [BR:
ghi03110
]
107897606
Enzymes [BR:
ghi01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
107897606
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107897606
Chaperones and folding catalysts [BR:
ghi03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
107897606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
Rotamase_2
X8
Motif
Other DBs
NCBI-GeneID:
107897606
NCBI-ProteinID:
XP_016678594
UniProt:
A0A1U8IRQ5
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All DBs
Position
A10:complement(20120816..20123177)
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AA seq
122 aa
AA seq
DB search
MSSSSPANQVRASHILIKHQGSRRKASWKDPEGRVISNTTRDAAVSQLKALRDDITSGNA
KFGEVASRHSDCSSAKRGGDLGPFGRGQMQKPFEDATYSLNIGEISDIVDTDSGVHIIMR
TG
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcatcgcccgccaatcaagtgagggcttctcacatcctcatcaagcaccaa
ggctcccgccgtaaggcctcttggaaggatcctgaaggtcgcgtaatctccaacactacc
cgagatgccgccgtctcacagctcaaagccctccgtgacgacatcacttctggcaacgct
aagttcggtgaggttgcctctcgccactccgattgcagctccgctaaacgcggcggggac
cttggtccttttggtcgaggccagatgcaaaagccatttgaggatgcaacatatagcctt
aatattggtgagataagtgacatcgtggatactgatagcggagttcacatcattatgaga
acaggttga
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