Gossypium hirsutum (upland cotton): 107898797
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Entry
107898797 CDS
T04793
Name
(RefSeq) probable beta-D-xylosidase 5
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00520
Amino sugar and nucleotide sugar metabolism
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
107898797
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
107898797
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
107898797
NCBI-ProteinID:
XP_016679830
UniProt:
A0A1U8INX8
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Position
D04:complement(54376547..54379926)
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AA seq
788 aa
AA seq
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MKLKTQFSFALCLSFFLVLVPYNTQAQPFACDKNDPNTSKFPFCDTTLSYQDRTKDLVSR
LTLQEKVQQLVNTASGIPRLGVPAYQWWSEALHGVSDLGPGTRFNATVPGATSFPAVILS
AASFNEMLWLEMGRVVSTEARAMYNVGLAGLTYWSPNVNVFRDPRWGRGQETPGEDPTVV
SKYAVNYVRGLQEVGSVGDKLKVSSCCKHYTAYDVDNWKGVDRFHFDAKVTKQDLEDTYQ
PPFKSCVVEGHVSSVMCSYNRVNGIPTCADPDLLKGIVRGQWGLDGYIVSDCDSIEVYYN
AIHYTATPEDAVALALKAGLNMNCGDYLGKYTVNAVNLKKVEESVVDQALIYNYIVLMRL
GFFDGNPKQLLFGNLGPSDVCTDDHQKLALDAAKQGIVLLDNDGVLPLSRTIIKSLAVIG
PNANATKVMISNYAGVPCQYTTPLQGLQKYVSMVTHEAGCRDVKCNNDTFIDLAVQAAAN
TDAVVLLVGLDQSIEAEGLDRVNLTLPGYQEKLVTDVANAANGKVVLVVMAAGPIDITFA
RNMRKIGAILWVGYPGQAGGDAIAQVIFGDHNPAGRSPFTWYPQEYANKVPMTDMNMRAN
ATTNFPGRTYRFYTGKTLYEFGHGLSYTSFSKFIISAPSTVLINSTPNNILLEPYSNNGE
AIDASSVSNCDDLQFNLMIGVKNNGPMDGDHVVLLFWKPPSTKGVTGAPNMQLIGFERVG
VKKGKTKNVTVSLNVCKDLSLVDVEGKRKLVIGQHTIFVGTTSEHQVRHHFVVRQAGDES
GEPLVSIT
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaaaacccagttttcttttgctttatgcctctcatttttccttgttctcgtc
ccatataacactcaagctcagccatttgcatgcgacaaaaatgatcctaatacgagcaag
ttccccttttgtgacacaaccttatcttaccaggaccgaaccaaggaccttgtttcacgc
ctcacactccaagaaaaggttcaacagttggtgaacacagcctccggcattccccggctc
ggggtgccagcttaccagtggtggtcggaggccctccacggcgtgtcggacctcggtcca
ggcactcggtttaacgccacggtgcccggtgcgactagtttccccgctgtgattttatcc
gccgcgagtttcaacgagatgttgtggctcgagatggggcgagttgtctcgaccgaggct
cgagccatgtacaatgtcggtctagccgggctgacatattggagccctaatgttaatgtg
ttccgcgacccaagatggggtcgtggacaagaaacgccgggggaggaccctacggtggtc
tcgaaatatgctgtgaattacgtgcggggattgcaagaagttggctccgtgggggacaag
cttaaggtttcaagttgttgtaagcattacactgcttatgatgtggacaactggaaaggc
gtggaccggttccattttgatgcaaaggttacgaagcaggacttggaagatacgtatcag
ccaccatttaagagctgtgtagtggaaggacatgtgagcagtgtaatgtgctcatacaat
agggtgaatggcatccctacttgtgctgatccagaccttctcaaaggcatagttagaggc
caatggggacttgatggatacattgtttcagactgtgactcaattgaggtttattataat
gccatccattacactgcaacacctgaagatgcagtggcccttgctttgaaagcaggttta
aacatgaattgtggggattatttggggaaatacacggtgaatgcagtcaatttgaagaaa
gtagaagaatctgttgttgatcaggctttaatatataactatatagttctaatgaggctc
ggtttcttcgatggaaacccaaaacagcttctgttcggtaacctcggtccatccgatgta
tgcacagatgatcaccagaagctggccctcgatgctgccaagcaaggaatagttttactc
gacaacgacggagtccttcctctgtctcgaaccatcataaagagtttagccgttatcgga
ccgaacgctaatgccacgaaggttatgataagtaactacgccggtgtaccttgccagtat
actacccctttacaagggctgcaaaagtatgtctcaatggttacacatgaggcagggtgt
agggatgtgaaatgcaataatgatacatttatcgatctcgcggttcaggcagcggcgaac
accgatgctgtggtgctccttgtggggctagatcaatcgatcgaggccgaagggctcgat
agagtgaacttgacattgccaggatatcaagagaagttagtgactgatgttgctaatgca
gcaaatggaaaagtggtccttgtagttatggctgctggtcctattgatataacatttgca
aggaacatgcgaaaaatcggagccattttatgggtagggtatccgggtcaagcaggagga
gacgccattgctcaggtcatatttggagaccataatccagctgggaggtcaccattcaca
tggtacccccaagagtatgccaataaagtcccgatgaccgacatgaacatgcgagccaac
gccaccacaaacttccctggacgaacctatcgattctacaccggcaaaaccctttacgaa
ttcggacacgggctaagttacacatcattctccaaattcataatatcagctccttccaca
gtactaatcaactcaacaccaaacaacatcctcctcgaaccatactccaacaacggcgaa
gcaatcgacgcatcaagcgtttcaaactgcgacgacctgcaattcaacctcatgatcgga
gttaaaaacaatggaccaatggacggagatcacgtggttctcctcttttggaagccaccg
agcacgaaaggggtcaccggtgcaccgaacatgcagttgatcgggttcgagagggttgga
gttaagaaagggaagaccaagaatgtgacagtgagcttaaatgtgtgcaaagacctgagc
ttagtggatgttgaagggaagaggaaactggttataggacaacataccatttttgtaggc
acaaccagtgagcaccaagtgaggcaccattttgttgtgaggcaagcaggggatgaaagt
ggggaacctttagtctctattacttaa
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