Gossypium hirsutum (upland cotton): 107904497
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Entry
107904497 CDS
T04793
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-1
KO
K01309
ubiquitin carboxyl-terminal hydrolase MINDY-1/2 [EC:
3.4.19.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107904497
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107904497
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
107904497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY_DUB
Motif
Other DBs
NCBI-GeneID:
107904497
NCBI-ProteinID:
XP_016686379
UniProt:
A0A1U8JDQ8
LinkDB
All DBs
Position
D11:1714816..1724326
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AA seq
721 aa
AA seq
DB search
MSAAASSSSSVYESRDAVKEKQPKQEVIKDCTYKTKAIQFLGRTTPIILQNDNGPCPLLA
ICNVLLLSNNLNLSPDIAEVSQEKLLSLVAERLIDSNSNVDNKDAGYVENQLRNIADAID
LLPRLATGINVNIKFRRTDDFEFTSECAIFDLLNIPLYHGWIVDPQDYQTASAVGSKSYN
AIMEELVALEARNMEVLRKSNSGDCVDFAAATTATLGVPSPCLLKTKSFDESPRSLSGQK
ILRKGDLDEEAELLRVLKLSEAESQNSVSDPGSSHERSCSKNLVSVDTLEGEKGVENPNL
QWTEPSLSDNCTSLSNDSGSKICSKTLKREESQKTDGINQHQSSYVKSGEINLSNDVAEN
KGNGAEELVQVEGALPVYLAKDTASNNGNNTEILQGVQKIEIQSDSTTDPHDIPDNVNGC
LIIKVSSVALQNAGSDSSSGRMHHANVPQSEPIYEGEECIADSATTATTYENPEPMYEGE
AILAKQVDQRAVDDCNVRSKDEITPQQGELIGNFLKNNASQLTFYGLFCLQDGLKERELC
VFFRNNHFSTMFKYNGELYLLATDQGYLNQPNLVWEKLNEVNGDTLFMTSSFKEFKVNDN
HVTGTWDEQNAMASTADYIASIDSAVQAGLDVNSDLQLAIALQQQEFEEDPPPRQPPPVV
GGSRLVTTQQGQRSSGRSSSSSSSSSSPKEDTKSKDVYCDVSFCFKSIWRKTLFTVNGLF
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggctgcttcttcgtcttcttctgtgtatgaatcgagagacgcagtgaaagaa
aaacaaccaaagcaagaagtaattaaagattgcacatacaagactaaggctatccagttc
ttaggtcgtactacgcctattattctccaaaacgacaatggaccttgccctctcctcgcc
atctgtaatgttctccttttaagcaacaacttgaacctgagtcccgatatagccgaagtt
tcgcaggagaaactactttcactggtggccgagcgcctcattgattccaacagtaatgtc
gacaataaagatgccggatacgtcgaaaatcaactgcggaatattgctgatgcgatcgat
ttactccctcgtcttgctacagggattaatgtaaatatcaaattcaggagaacagacgat
tttgagttcacttcagagtgtgccatattcgatctacttaatattcctctctatcatggt
tggatagttgatccccaggactatcaaactgcttctgccgttggttcaaaatcctacaat
gcaattatggaagagcttgttgcactggaagcacgaaatatggaggttttacgtaaaagt
aactctggagattgtgtggattttgctgctgcaacaactgccactctgggagttccctct
ccttgcctcttgaaaaccaaatcttttgacgagtctcctcgttctttgtctggtcagaaa
atattaagaaaaggggatctcgatgaggaagcggagctactgagagtcttgaaattatca
gaggctgaatcgcaaaactcggttagtgatcctggcagttcccatgaaagatcatgttca
aagaatcttgtttctgtagatacactagagggggaaaaaggcgttgaaaatccaaacttg
cagtggaccgaaccttccttatcagataattgcacttccttgagcaatgatagcggtagt
aagatatgttccaagaccctcaaaagggaagagtcccagaagactgatgggattaatcag
catcagtcatcttatgttaaatccggagaaattaacctttcaaatgatgtggctgagaat
aaggggaatggtgcagaagaactggtccaggttgaaggtgcacttcctgtttatctggca
aaagatactgcttctaacaatggaaataacactgaaatattgcaaggggttcaaaaaatc
gagattcaatccgattctacaaccgatcctcatgacattcctgataatgtgaatgggtgc
ctgatcataaaagtatcatccgtggctttacaaaatgccggttcagattcttctagtggc
agaatgcatcatgcaaatgtgcctcaaagtgaacctatatacgaaggcgaagaatgcata
gcagattctgcaacaacagcaacaacatacgaaaacccggagccaatgtatgaaggtgag
gcaattcttgcaaaacaagttgaccaaagagctgtagatgactgcaatgtaaggtctaaa
gatgaaatcactccacaacaaggggaactgatcggaaacttcttgaagaacaatgccagt
caattgaccttttatgggcttttttgcttacaagacggacttaaagaacgcgaactttgt
gtttttttccgtaataatcatttcagcaccatgtttaagtataatggtgaactctatctt
ttagctactgaccaaggctatctaaatcagcccaatttggtttgggaaaaactaaatgag
gtcaacggagacacgctgtttatgaccagcagcttcaaggagttcaaggtgaatgataat
catgtcacaggtacttgggatgagcaaaatgctatggccagtactgctgactacattgcc
agcattgatagtgcagtgcaagctggattggacgtaaactcggatttacagcttgcaata
gctctgcaacaacaggaatttgaagaagacccaccaccgcgtcagccaccacccgttgtt
ggtggttcaagattagtaacaactcaacaggggcagagaagcagtggaaggagctcctcg
tcgtcatcttcgtcttcatccccgaaggaagatacgaaatcaaaagatgtgtattgtgat
gtaagtttttgctttaaatccatttggagaaagactttgtttactgtaaatggtttgttt
ctttga
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