Gossypium hirsutum (upland cotton): 107910565
Help
Entry
107910565 CDS
T04793
Name
(RefSeq) nuclear poly(A) polymerase 3 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107910565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107910565
Enzymes [BR:
ghi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
107910565
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
107910565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
NTP_transf_2
PAP_RNA-bind
Motif
Other DBs
NCBI-GeneID:
107910565
NCBI-ProteinID:
XP_016693922
UniProt:
A0A1U8JUG5
LinkDB
All DBs
Position
D02:8289274..8294989
Genome browser
AA seq
492 aa
AA seq
DB search
MKEERSLSLLQLMVNEGLVPSPEEEENRKTVIEKLKQIVVAWVKRVAWQRRLPKQDIAVT
SATLLTYGSYGLGVHGSESDIDALCVGPYFATMVDDFFIVLYNMLKSRPEVSEIYCVKDV
KVPLMRFVFDGILIDLPFVQLKVLVVPENLDILNPVFLRDIDETGWKSLSRVLANTQICR
LVPDLKKFQSMLRCVKFWAKRRGVYGNLNGFLGGIHLAILAAFVCQCDPFVGLSALISHF
FKKFAFWPWPRPVELQDETLHPTLNPTETRLYMPIRLPFSSYEYCHSNITKSTFYKIRTE
FLRGHNLTKDLLKFDFDWHNVLEPFPYTKKYAWFLKIFLSASKQDELGDWVGWIKSRFCC
LLFKLEEVQGLCDPNPAEYIDVNIADPHVIFYWGLQAGKTNAIDIKSVKDVFWRNISTGY
QGPFGKIELSIVQASQVPKSAQFDTLSQKKKACWKMMDYHQRRIPIYSQHVPQYIVGYVS
TNGDPEYPSAGV
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaggaaagatcactctcacttcttcagttaatggtgaatgaaggactggtgcca
tctccagaagaagaagagaataggaaaactgtcattgaaaaacttaaacaaattgtagtg
gcgtgggttaagcgagtagcttggcaacgccggcttcctaaacaagacatagctgttact
agtgctaccttattaacatatggctcttatggccttggggttcatggttcagagtcagac
attgatgctttatgtgtcggtccttactttgccaccatggtagatgatttctttattgtt
ctatataacatgcttaagagcagacctgaggtatctgagatttattgtgtaaaagatgta
aaagtcccactaatgcgttttgtgttcgatggaatcttgatagatcttccctttgtgcag
cttaaagttttagttgttccagagaatttagacattttaaatcctgtgtttttgagagat
attgatgaaactggttggaaaagcttgtccagggtgctcgcaaacacacagatttgtcgg
cttgttccggacttgaagaaattccagtcaatgttacgatgtgtcaaattttgggcaaag
agacgaggagtgtatggtaatctaaatgggtttcttggaggaattcatttggcaattctt
gctgcttttgtttgtcaatgtgatccatttgtgggtttgagtgctctaatttcacatttc
ttcaaaaaatttgctttttggccttggcctagaccggttgaactgcaagatgaaacgtta
catcctactctaaatcccacagagacgcggttatatatgcccattcggttgccatttagt
tcttatgaatattgccattcaaacatcactaaaagcacattctataaaatcagaactgag
tttcttcgtggccataacttaaccaaggatcttctgaagtttgattttgattggcacaat
gtattggagccttttccttacacaaagaaatatgcttggtttctcaaaatttttctttca
gcttctaagcaggatgagcttggagactgggtgggttggataaagtctcgcttttgctgt
cttctcttcaagctagaggaggtacagggtctttgtgacccgaatcccgcagaatacatc
gatgtcaacatagcagacccacatgtcattttctactggggcttacaagcaggaaaaact
aatgccatagacatcaaatccgtgaaggatgttttctggaggaatatcagtaccgggtat
caaggccctttcggaaaaatagagttatctattgtgcaagcctctcaagttcccaagtct
gctcaattcgataccttgagccagaaaaaaaaagcttgttggaagatgatggactaccat
caacgaaggatccctatatactcgcagcatgttccgcagtatattgttgggtacgtatcg
acaaatggggaccctgagtacccaagtgctggggtatag
DBGET
integrated database retrieval system
