Gossypium hirsutum (upland cotton): 107924098
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Entry
107924098 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107924098 isoform X1
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00500
Starch and sucrose metabolism
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
107924098
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
107924098
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Alpha-amyl_C2
AMT4_dom_C
BING4CT
Motif
Other DBs
NCBI-GeneID:
107924098
NCBI-ProteinID:
XP_016709865
UniProt:
A0A1U8L5I7
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Position
A11:7187988..7202554
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AA seq
966 aa
AA seq
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MGVFVLPSSAFGVLLPHFPVVSLGTPRGQFHLVLGSSSNRKRKNLLTGNWQCRPRIVAAS
NRDNSKDNVTDDEDGSLLGSYEMLEMKEDELVEARRALSEVKARQAALEKEREQLLEDFA
SSEAKQKEYVASVLHDKELAVSELESTKSLFHQKLQESVKEKFALESKLVLARQDAVELA
VQVEKLAEVAFRQATSHILEDAKLRISAAETLAAESAFQIDEQIRKSTEGTIFSIIEESK
DAINKALDVAENAIDEATQAVAVFTDAVNPIDVIASAQSENIKLQGAVSDLEAQLLVSES
ELDRLKLELQQAQVQANAAELRSSNAEKALLEFQELSRKKALEQEEEIRSLLEKIKKEAV
ERKKALSKAFKAELESIKAAVDASKEITCSRDNAYMRRCEALQRSLRTSESALKMWRQRA
EMAQSLLLKERSEKEDDEDVIYIANGGRIDLLTDDDSQKWKLLSYGPRKEIPQWMARRIR
SIRPKFPPRKTDISKALNSSFKSLELPKLDEVWSIAQEKLREGDMLTEHVIEKEVIEKKR
KALERALQRKTVKWKRIPEETKIEPGTGTGREIVFQGFNWESWRRQWYQELAFKAADLSH
SGITAVWLPPPTQSVAPQGYMPSDLYNLNSSYGSVEDLKSCIEEMHSQELLALGDIVLNH
RCAHKQSPNGVWNIFGGKLAWGPEAIVCDDPNFQGHGNPSSGDIFHAAPNIDHSQHFVRK
DVKEWLYWLRNDIGYDGWRLDFVRGFSGTFVKEYIEASNPAFAIGEYWDSMAYEHGNLCY
NQDAHRQRIVNWINATGGTSSAFDVTTKGILHSALHDQYWRLIDPQGKPTGVMGWWPSRA
CTFLENHDTGSTQGHWPFPRDKLTQGYAYILTHPGTPVIFYDHFYEFGIRDVLTELIEAR
RRAGIHCRSSVKIYHANTEGYVAQVGNMLVIKLGHFDWNPSKENQLDGRWQKFIDKGADY
QIWLRQ
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtttttgtattaccaagttcagcctttggggtgcttcttccccacttccctgtt
gtttcattaggcacgccacgtgggcagtttcatttagtcttgggaagctcttctaacagg
aaaaggaagaatttacttactggaaactggcagtgcagaccaaggatagttgctgcctca
aatagggataattccaaagacaatgtcacagatgatgaggatggttctttgttggggagt
tatgaaatgttggagatgaaagaagatgagttagtggaggcgagaagggctctttctgag
gttaaggccagacaagcagcccttgaaaaagaaagagaacaattgcttgaagactttgct
agttctgaggctaaacagaaggaatatgtggcttccgttttgcatgacaaagaattggct
gtttcagaactggagtcgaccaaatctctgttccatcagaagctgcaggagtcagtgaaa
gagaaatttgccttggaatctaagttggttcttgcaagacaagatgctgttgaacttgca
gtacaagttgaaaagttagcggaggttgctttccgacaggccacatctcacatattagaa
gatgccaagctgaggatttcagctgcagaaaccttggctgctgagtcagcttttcaaatt
gatgaacagataagaaaatcaaccgaaggtactatattctcaattatagaggagtctaaa
gatgctataaataaggcccttgatgtggctgaaaatgccattgatgaggctacacaagct
gtagcagtattcactgacgctgtaaatcccattgatgttattgcttctgctcagtctgag
aatattaagttacaaggtgctgtcagtgatttagaagctcaactattggtttcagagagt
gagcttgataggttgaaactggagttgcaacaggcccaagtacaagcaaatgcagctgaa
ctccgatccagtaatgctgagaaggcattgcttgaattccaagagttgagtaggaaaaag
gctcttgagcaggaagaggagattaggtctttactggagaaaataaagaaagaagcagtt
gaaagaaagaaggctttgtccaaggcttttaaggctgagttggaaagcatcaaggctgct
gttgatgcttccaaagaaataacatgttcaagagacaatgcctacatgagaagatgtgaa
gccctgcagaggtcactgaggacatctgagagtgctttaaagatgtggagacagagagca
gagatggcacagtcattgttgttgaaggaaagatcagaaaaggaagatgatgaagacgtc
atctatatagctaatggtgggaggatagaccttttgactgatgatgattcacagaaatgg
aaacttctgagttatggtccacgtaaagagatacctcagtggatggcaagaaggattagg
agcatccgtccaaagtttcctcctagaaagacagacatatctaaagccttaaattccagt
tttaaatcgttggaattgcccaaacttgatgaggtttggtctattgctcaagaaaagcta
agagaaggtgatatgcttactgaacatgttatcgaaaaagaagtaatagagaagaaacgg
aaagctttggaacgagcactccagcgaaagacagttaaatggaagaggattccagaagaa
acaaaaatagagccaggaactggaacaggacgagaaattgtgttccaaggtttcaattgg
gaaagttggagaaggcaatggtaccaggagctagctttcaaggcagctgatttatctcat
tctgggataacagcagtatggctcccaccaccaacacaatctgttgcaccccaaggttat
atgccttctgatctttacaacttgaactcctcatatggatctgtcgaagacctgaaatct
tgtatagaggaaatgcattctcaggaacttctggcattgggagatattgtgcttaaccat
agatgcgcacataaacagagtccaaatggcgtctggaatatttttggcggcaaacttgca
tgggggcctgaagctattgtttgtgatgatccaaatttccagggccatgggaatccttca
agtggtgatatcttccatgcggcaccaaatattgatcattcgcagcactttgtgcgaaaa
gatgtaaaggaatggttatactggctccgtaatgatattggttatgatgggtggcggctt
gactttgtgagaggcttctctggaacatttgtgaaagaatatatagaagcttcaaatcct
gcatttgctataggagaatattgggacagtatggcttatgaacatggtaacttatgttac
aatcaagatgctcaccggcaacggatagtaaactggatcaatgccactggtggtacttcc
tcagcttttgatgtcacgacaaaggggatactccactctgctttacatgatcaatactgg
agactgatagatcctcaaggaaaaccaacaggagtaatgggatggtggccttcacgcgca
tgtacgtttttagagaaccatgatacgggatctacccagggtcactggccttttccccgt
gataagcttacacaaggatatgcttacatcttgacgcatccgggaactcctgtaatattt
tatgaccacttttatgaatttggcatccgtgatgtcttgacggaattaatagaagctcga
agacgggctgggatccactgccgaagttctgtcaagatataccacgccaataccgaaggt
tatgttgctcaggtcggcaatatgctagtgatcaaactagggcatttcgattggaatcct
tcaaaggaaaatcagttggatgggagatggcaaaagttcattgataaaggagcagattat
caaatttggttaagacagtaa
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