Gossypium hirsutum (upland cotton): 107951801
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Entry
107951801 CDS
T04793
Name
(RefSeq) DNA gyrase subunit B, chloroplastic/mitochondrial
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghi03032
]
107951801
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107951801
Enzymes [BR:
ghi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
107951801
DNA replication proteins [BR:
ghi03032
]
Prokaryotic type
DNA Topoisomerases
107951801
DNA repair and recombination proteins [BR:
ghi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
107951801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
TOPRIM_C
HATPase_c_3
Motif
Other DBs
NCBI-GeneID:
107951801
NCBI-ProteinID:
XP_016742436
UniProt:
A0A1U8NTX6
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Position
A02:79716559..79732376
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AA seq
728 aa
AA seq
DB search
MALLPRYLYPHLPLRLMASRSHFFVHFPSFHSLASFPRHSIFFHPRTNFALKSICWFPVQ
NVLTPRAFMSSNITTEAFHGSKSSKAYNSEQIQVLEGLDPVRKRPGMYIGSTGPRGLHHL
VYEILDNAVDEAQAGFATQIDVVLHSDGSVSITDNGRGIPTDFHPVTKKSALETVLTVLH
AGGKFGGLSSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGMEYRQKYSRGKPVMPLTCH
GLSTESKDRQGTCIWFWPDNKIFTTAIEFDYNTLAGRIRELAFLNPKLTITLKKEDNDPE
KSLYNEYFFAGGLFEYVKWLNADKKPLHDVLGFSRQIDGTIIDVALQWCSDAYSDTMLGY
ANSIRTIDDGTHIEGVKASLTRVLNNFGKKSKIIKDKDISLSGEHVREGLTCIISVKVSN
PEFEGQTKTRLGNPEVRKVVDQSVQEFLTEYLELHPDVLDSILSKSLNAFKAALAAKRAR
ELVRQKSVLKSSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK
ILNIERRDEAAMYKNEEIQNLIIALGLGVKGEDFKIEHLRYHKIIILTDADVDGAHIRTL
LLTFFFRYQRALFDEGCIYVGVPPLYKVERGKQVHYCYHDADLQKVLSSFPQNASYNIQR
FKGLGEMMPAQLWETTMDPEQRLLRQLVVEDAAEANRVFSSLMGAQVDARKELIQNFASK
INLDKLDI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcttccgcgatatctttatcctcatcttcctcttcgtcttatggcctctcgc
tctcatttttttgttcattttccttcttttcattctctcgcttcctttcctcgtcattcc
atctttttccaccccaggacaaactttgcattgaagagcatttgctggtttccagttcaa
aatgtacttacgccaagggcatttatgtcttctaacatcacaactgaagcttttcatgga
agcaaaagctcgaaagcttataactctgagcaaattcaggttctggaaggattggaccct
gttagaaaaagacccggaatgtatattggaagtacaggtcctcgtggtttgcaccatttg
gtatacgagattttggataatgctgttgatgaggctcaagcaggttttgcaacacaaata
gatgttgttttacattcagatggttccgtgagcataactgataatgggcgtgggattcca
actgatttccatcctgtcacaaagaaatctgccttggaaacagtgttgacggtgttacat
gcaggtggcaagtttggtggcttaagtagtggttacagtgtctctggtggcttgcatggt
gtgggtttatctgtggttaatgccttatctgaggctttagaagtcactgtttggagagat
ggaatggaataccggcaaaaatattcacgggggaagcctgtaatgccactaacatgtcat
gggctttcaactgaatcaaaggatcgtcaagggacatgcatttggttttggcctgacaat
aaaatatttaccactgcaattgagtttgactacaacacacttgctggacgaattagagaa
cttgcttttctgaaccctaagcttactatcactcttaaaaaagaagataacgatccagag
aagagcctttataatgaatatttctttgctgggggactgtttgaatatgtgaaatggcta
aatgctgataagaaaccacttcatgatgtgctaggtttcagcagacaaatagatggaacc
ataattgatgttgctctccagtggtgttcagatgcatattcagatacaatgttgggttat
gccaacagcatacgaaccattgatgatggcacacatatagaaggggtcaaggcttcattg
acaagagtcctcaataactttggaaaaaagtctaagattatcaaggataaggatattagc
ttaagtggtgaacatgttagggagggactgacatgcattatttctgtgaaagtgtcaaat
ccagaatttgaaggacaaactaagacaagattgggaaatcctgaggtgcgaaaagtggtt
gatcaatctgttcaagagtttcttactgaatatttggagttgcatccagatgtacttgat
tcaatcctttccaagtccctaaatgctttcaaggcagctcttgcagcaaaaagggcaagg
gaattagtccggcaaaagagtgtgttaaaatcatcatctcttcctggaaaactggccgat
tgttcatccacaaatccagaagaatctgagattttcatagttgaaggagactcagctggt
ggcagtgccaagcaaggccgcgataggcgctttcaggccatccttcccctgaggggtaaa
attttgaatattgaaaggagggatgaggcagcaatgtacaaaaacgaagaaattcaaaat
ttgattattgctcttggacttggggtgaagggagaggattttaaaatagaacacctacgg
tatcataagatcattatcttaacagatgctgatgtagatggtgctcatatccgaactctg
cttctgacatttttcttcagatatcagagagccttatttgatgaaggttgcatttatgtt
ggtgttccacctctttacaaggttgaaaggggaaaacaagtacactattgttatcatgat
gcagaccttcaaaaggtcttgagctcgttcccgcagaatgcatcatacaacattcagaga
ttcaaaggtttgggtgagatgatgccagctcagctgtgggaaacaacaatggatcctgag
caaaggttactgaggcaattagtggttgaagatgcggctgaagctaatagagtgttttca
tcccttatgggtgctcaggtggatgcaaggaaggagctcatccagaattttgcaagcaag
atcaatctcgataagctggatatttga
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integrated database retrieval system