KEGG   Guyparkeria halophila: GM160_06895
Entry
GM160_06895       CDS       T06369                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
ghl  Guyparkeria halophila
Pathway
ghl02020  Two-component system
ghl02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ghl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GM160_06895
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    GM160_06895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ghl03021]
    GM160_06895
Transcription machinery [BR:ghl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GM160_06895
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID VMAP-M8 HTH_21 HTH_IclR
Other DBs
NCBI-ProteinID: QGT79589
UniProt: A0A6I6CZC3
LinkDB
Position
1523134..1524609
AA seq 491 aa
MKAGLELRLGQSLAMTPQLQQSIRLLQLSTLELSLEIQQALDSNPLLEVAEDEREEDEAT
EATTAEEQDPGAQAGEELLEDRKDKSADEDLVVDSSWDDYYESDGSTALSASAPGEDYDP
FATQSTGEDNLRDHLLSQVHLASLSDTDRRIATALIESLELSGYLEEPLDEIVAMLAEDL
PGIDTEEVEATLHYIQQLDPVGVAARSLAECLTIQIDQHHADDPAADDARALLQDDWLEA
IARRELPQVIKGLGISRERLEAALRLIQVLDPRPGLSIGDTAADYIKPDVIVTHREDGWH
VDLNPEIAPRLRVNQTYASLIDRSSRGKDATYIRNHLQEARWFIKSLRSRNESLLNVARE
IVRRQIEFFEQGEIAMKPLVLREIAETLELHESTVSRVTTNKYMLTPRGVFEFKYFFSSH
VGTSDGGECSATAIRARIKKLVEEENPKKPLSDAKIATMLGDEGIDVARRTIAKYREAMG
IASSTDRKRLI
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgaaggcaggtctcgagcttcgcctgggccagtcgctggccatgacgccgcagttgcag
cagtccatccgcctgctgcagctctccacgctggagctgagcctggagatccagcaggcg
ctggacagcaacccgctcctggaagtggccgaggacgagcgcgaggaggacgaggcgacc
gaggcgaccaccgccgaggaacaggaccccggcgcccaggccggcgaggaactgctcgag
gatcgcaaggacaagtcggccgacgaggacctggtggtcgattcctcctgggacgactac
tacgagtccgacggcagcaccgccctgagcgccagcgccccgggcgaggactacgacccc
tttgccacgcaatcgacgggtgaggacaacctccgcgaccatctgctcagccaggtccat
ctcgcctccctctcggacaccgaccgtcgcatcgccaccgcgctgatcgagtcgcttgag
ctctccggctatctcgaggaaccgctggacgagatcgtggccatgctcgccgaggacctg
ccgggaatcgacaccgaggaggtggaggccacgctccattacattcagcagctcgacccg
gtcggggtggcggcgcgatcgctggccgaatgcctgaccatccagatcgaccagcatcac
gccgacgacccggcggccgacgatgcccgcgccctgctccaggacgactggctcgaggcc
atcgcccggcgcgagctgccgcaggtgatcaaggggctgggtatcagccgcgagcggctc
gaggccgccctccgcctgatccaggtgctcgatccccgcccggggctgtcgatcggcgac
accgccgccgactacatcaagccggacgtgatcgtcacccaccgcgaggatggctggcat
gtcgacctcaaccccgaaatcgccccgcgcctgcgcgtgaaccagacctacgccagcctc
atcgaccgctccagccgcggcaaggacgcgacctacatccgcaaccacctccaggaggcc
cgctggttcatcaagagcctgaggagccgcaacgagtcgttgctgaacgtggcgcgggag
atcgtgcggcgccagatcgagttcttcgagcagggcgagatcgcgatgaaaccgctggtg
ctgcgcgagatcgccgagacactcgaactgcacgaatcgacggtcagccgggtcaccacc
aacaagtacatgctcaccccgcggggcgtgttcgaattcaagtatttcttctccagccac
gtcggcaccagtgacgggggcgaatgttcggccaccgccatccgcgcccgcatcaagaag
ctcgtcgaggaagaaaatcccaagaagcccttgagcgacgccaagattgcgaccatgctt
ggagacgaggggatcgacgtcgcgcgacgcacgatcgccaagtaccgcgaggcgatggga
attgcctcgtcaacagaccgcaagcgactgatataa

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