Gordonia hongkongensis: MVF96_22325
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Entry
MVF96_22325 CDS
T08182
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
ghn
Gordonia hongkongensis
Pathway
ghn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ghn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MVF96_22325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghn03400
]
MVF96_22325
DNA repair and recombination proteins [BR:
ghn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MVF96_22325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
UPG68077
LinkDB
All DBs
Position
complement(4946065..4947066)
Genome browser
AA seq
333 aa
AA seq
DB search
MAPMRSIWKGDLSFGLVNVPVKVYSATESHDRKSYQVDSSDGTRIRYRRVREGTDTEVDY
GDIANAYESESGETVILTKEDLATLPVQKSPEISILEFVPAEQVDPIYFDKPYYLEPSSK
SPKAYVLLAKALEETDRLAIASFTLRNRTRVAALRVVDGVMTLQTLLWPDEVRKPDFGFL
DDDTEIRDQELQMAASLIESMASDYDPSEFEDTYQNELTKLIEAKSEGGEAFPESDDEDK
DTEDSDVADLLAALRASVKDRGGSDSKDSDSKDTAAKKAPAKKAAAKTAAKKAPAKKTAS
KSTAKKTSSGSGESGSKSTAKKAPAKKSSRKAS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcccccatgcgctcgatctggaagggcgacctcagctttggcctggtcaacgtgccg
gtcaaggtctattccgcgaccgagagtcacgaccggaagtcgtatcaggtcgactcgtcg
gacggaacccgcatccgctatcgccgcgtgcgcgagggcaccgacaccgaagtcgactac
ggcgacatcgccaacgcctacgaatccgagtccggcgagaccgtgatcctcaccaaagaa
gacctcgccacgctgccggtgcagaagagtcccgagatctcgatcctggagttcgtaccc
gccgagcaggtcgatccgatctacttcgacaagccttactacctcgaaccgtcgtcgaag
tcgccgaaggcctacgtcctgctggccaaggcgctggaggagacggaccggctcgcgatc
gcctccttcactctgcgcaaccggacacgcgtggccgcgctgcgcgtcgtcgacggggtg
atgacgctgcagacgctgctgtggcccgacgaggtccgcaaacccgacttcggcttcctc
gacgacgacaccgagatccgcgatcaggaactgcagatggcggcctcgctgatcgagtcg
atggcatcggactacgacccctccgagttcgaggacacctatcagaacgagctgacgaag
ctcatcgaggcgaagtccgagggtggcgaggcgttccccgaatccgacgacgaagacaag
gacaccgaggactccgacgtcgccgatctcctcgccgcgctgcgcgcgtcggtgaaggac
cgcgggggatccgattcgaaggattcggactcgaaggacaccgcggccaagaaggcaccg
gccaagaaggctgcggcgaagacggccgcgaagaaggcgccggccaagaagaccgcttcc
aagtcgacggcgaagaagacctcctcggggtccggcgagtccgggagcaagtccacggcc
aagaaggcgcccgccaagaagtcctcgcgcaaggcgagctga
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