Grimontia hollisae: AL542_12760
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Entry
AL542_12760 CDS
T04260
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
gho
Grimontia hollisae
Brite
KEGG Orthology (KO) [BR:
gho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gho03400
]
AL542_12760
DNA repair and recombination proteins [BR:
gho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AL542_12760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Rubredoxin_2
ChlI
DnaB_C
Lon_C
Rad51
AAA_22
GvpD_P-loop
SLFN-g3_helicase
RecA
AAA
ABC_tran
nSTAND3
Thio2_N
AAA_24
AAA_16
Viral_helicase1
AAA_14
Zeta_toxin
NTPase_1
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AMG31136
LinkDB
All DBs
Position
1:1962208..1963587
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AA seq
459 aa
AA seq
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MAKTKRAYVCNDCGADYPRWQGQCSACGAWNTITEVRLAASPTVARTEKYAGYAGATEAK
VQTLAAIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCWLASQ
MPTLYVTGEESLQQVAMRAERLGLPKDKLKMLSETNVETICSIARTEQPKIMVIDSIQVM
HCADVASAPGSVAQVRESAAALTRYAKQHNVAIFMVGHVTKDGTLAGPKVLEHCIDCSIL
LDGSSDSRFRTLRSHKNRFGAVNELGVFAMTGQGLREVSNPSAIFLSRGEEATSGSSVMV
LWEGTRPLLVELQALVDYSQLANPRRVAVGLEQNRLALLLAVLHKHGGLQMSDQDVFVNV
VGGVKVTETSADLALLLALISSFRDRPLPRDLVVFGEVGLAGEIRPVPSGQERLMEAAKH
GFQRAVVPIANAPKKEMPGMKVYGVSKLSDVLTVLDEMD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagacaaaacgtgcttacgtgtgcaacgactgcggagcggattacccacgttgg
caggggcaatgttctgcctgtggtgcatggaataccatcactgaagtacgtttggctgcg
tcccctacagtggctcgcaccgaaaaatacgccggttatgccggggcaaccgaggccaag
gtgcagacgctggcggcgattgatctgcaggaagtgccgcgctttaccagtggtttcaaa
gagcttgaccgtgtgttaggcggcggcattgtgcctggggcggctatcctgattggcggt
aacccgggggcaggtaaaagtacgctcttactgcaaaccatgtgctggcttgccagccag
atgccgacgctgtatgtcaccggtgaggagtcgctccaacaggtggcaatgcgtgccgag
cgtctcgggttgccgaaagacaagctcaagatgctgtctgaaaccaacgttgagaccatc
tgttcgattgcacgtactgagcagccgaaaatcatggtgattgactcgattcaggtgatg
cattgcgccgacgttgcctcggcgccgggcagtgtggcacaggtgcgtgaatcggcggca
gcgctgacccgctatgccaagcagcacaatgtggcgatctttatggtgggccacgtgacc
aaagacggcaccctggcaggcccgaaagtccttgagcactgtatagactgctccattttg
ctggacggttccagtgacagccgtttccgtaccctgcgcagtcataaaaaccgttttggt
gcagtcaatgaactgggggtgtttgcgatgacaggtcaggggttacgtgaagtgagcaac
ccttcggcaattttcctctcgcggggagaggaagccacctctggcagttcagtgatggtg
ttgtgggagggaacccgcccgctgttggttgagcttcaggcgctggttgattacagccag
cttgccaatccgcgccgtgtggctgtcggtcttgaacaaaaccgtctggcgctgcttttg
gcggtattgcacaaacatggtgggctgcaaatgtcggatcaggatgtgttcgtcaacgtg
gtgggtggcgtgaaagtcacggaaaccagtgctgaccttgcgcttttgctggcactcatt
tcaagctttcgggaccgtccgttgccgcgtgatttggtggtgtttggtgaggtgggcctt
gccggtgaaatccgtccggtgcccagcggtcaggaaaggttgatggaagcggccaagcac
ggttttcagcgcgcggtggtaccgatagcgaacgcaccgaaaaaagagatgccgggcatg
aaggtatatggcgtgagcaagctttctgacgtgctgaccgtgcttgatgaaatggactag
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