Gekko japonicus (Schlegel's Japanese gecko): 107107742
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Entry
107107742 CDS
T04299
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03082
ATP-dependent chromatin remodeling
gja03083
Polycomb repressive complex
gja04110
Cell cycle
gja04330
Notch signaling pathway
gja04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107107742 (HDAC1)
03083 Polycomb repressive complex
107107742 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107107742 (HDAC1)
04350 TGF-beta signaling pathway
107107742 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
107107742 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gja03036
]
107107742 (HDAC1)
Enzymes [BR:
gja01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107107742 (HDAC1)
Chromosome and associated proteins [BR:
gja03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
107107742 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
107107742 (HDAC1)
BRAF-HDAC complex
107107742 (HDAC1)
REST complex
107107742 (HDAC1)
SHIP complex
107107742 (HDAC1)
MiDAC complex
107107742 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
107107742 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
107107742 (HDAC1)
Chromatin remodeling factors
NuRD complex
107107742 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Peptidase_C101
Motif
Other DBs
NCBI-GeneID:
107107742
NCBI-ProteinID:
XP_015263545
LinkDB
All DBs
Position
Un
AA seq
480 aa
AA seq
DB search
MALTQGTKRKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPYKAS
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHG
DGVEEAFYTTDRVMTASFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMETFQPSAVALQCGSDSLSGDRLGCFNLTIKGHAKCVEFIKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALNTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQPIPEDAVLEDSGDEDEEDSDKRISIRSSDKRIACDEEF
SDSEDEGEGGRKNVVNFKKAKRVKTEEEEKEEEKKEVKEEEKAKEEMAEPKGVKEETKST
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcactcaggggaccaagcggaaagtctgctactactacgacggggatattggg
aactattattatggtcaaggccaccctatgaaaccccacaggatcaggatgacccacaac
ctcctcctcaactatggcctttacagaaaaatggaaatctatcgcccttacaaagcaagt
gctgaagaaatgaccaaataccacagtgacgactacatcaaatttctgcggtcaattcgc
ccagacaacatgtctgaatacagcaagcagatgcagcgattcaatgttggggaggactgc
cctgtatttgatggcttgtttgaattctgtcagctttctacaggaggctctgttgccagt
gcagtgaagctgaacaagcagcagacggacatcgctgtgaactgggcaggtggcttgcat
catgccaagaagtctgaggcctctggcttttgttacgtcaatgacatcgtcctggctatt
ttggaactgctcaagtaccaccagcgggtgctgtatgtcgacattgacatccatcatggc
gatggcgtggaagaggccttctacaccacagaccgcgtcatgacagcatcctttcataag
tacggagaatacttcccgggaacgggggacctgcgggacattggtgcagggaaaggaaag
tattatgctgtcaactaccctctccgggacggaatagatgatgagtcctatgaagccatc
ttcaagccagtcatgtctaaagtgatggagacattccagcctagtgccgttgcattgcaa
tgtgggtcggattctttatcgggggacagactgggttgttttaatctgaccattaaaggt
catgccaaatgtgtggagtttatcaaaagctttaacttgcccatgctgatgcttggagga
ggaggctatactattcgcaatgtggccaggtgctggacatatgagactgctgtggcattg
aacacagagatcccaaatgagcttccatacaatgattattttgaatactttggccctgac
ttcaagctccatatcagtccctccaacatgaccaaccaaaacaccaatgaatatctggag
aagattaagcagcgcctctttgagaacctgcgaatgcttccccacgctcctggggtccag
atgcagccgattccagaggacgctgtgctggaggacagtggagatgaagatgaggaagat
tctgacaaacggatttccattcgctcctcagataagagaatagcttgcgatgaagaattc
tccgactctgaagacgaaggggaaggtggacgcaaaaatgtggtgaacttcaagaaggcc
aaacgtgtgaaaactgaagaggaggagaaggaggaagagaaaaaagaagtcaaagaggag
gagaaggccaaagaagagatggcagagcccaagggggtgaaggaagagacgaaatcgact
taa
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integrated database retrieval system
