Gekko japonicus (Schlegel's Japanese gecko): 107126141
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Entry
107126141 CDS
T04299
Symbol
DDX46
Name
(RefSeq) DEAD-box helicase 46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107126141 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gja03041
]
107126141 (DDX46)
Enzymes [BR:
gja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107126141 (DDX46)
Spliceosome [BR:
gja03041
]
Complex A
U2 snRNP components
U2 related factors
107126141 (DDX46)
Complex B
107126141 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
107126141
NCBI-ProteinID:
XP_015285141
LinkDB
All DBs
Position
Un
AA seq
1050 aa
AA seq
DB search
MGRESRSTKQQVSKQKQHYRKRSSSRGRSGSRSRSRSPSDKRAKRGDDRRSRSRDRDRRR
ERSRSRDKRRSRSRDRKRVRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPGK
NKKVENRSRSKEKVEGVEVIKEKKKEKEDKEEEKDKDVSNFDQNKLEEEMRKRKERVEKW
REEQRKKAMENIGELKKEIEEMKQGKKWSLEDDDDDDEETAEGEKEGNEIEDEELDPLDA
YMEEVKEEVKKFNMRSVKGGGGSEKKTGPTVTKVVTVVKTKKASPETEKKKGELMVNDQD
AMEYSSEEEEVDLQTALTGYQTKHRKLLEPVDHGKIEYEPYRKNFYVEVPELAKMTQEEV
NAYRLELEGITVKGKGCPKPIKTWVQCGISMKILNSLKKHGYEKPTPIQAQAIPAIMNGR
DLIGIAKTGSGKTIAFLLPMFRHIMDQRQLEEGEGPIAVIMTPTRELALQITKEGKKFSK
TLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDE
ADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVC
SDVEQQVIVIEEDNKFLKLLELLGHYQEKGAVIIFVDKQEHADGLLKDLMRASYPCLSLH
GGIDQYDRDSIINDFKSGVCKLLVATSVAARGLDVKHLVLVINYSCPNHYEDYVHRAGRT
GRAGNKGYAYTFITEDQARYAGDIIKALELSGTPVPAELEKLWNDFKDQQKAEGKTIKKS
SGFSGKGFKFDETEEALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDM
ASSGGTSNVPAPTAGNAEKLEIAKRLALRINAQKNLGAEAQVLVSFQFKDVMQQATNAIL
RGGTIQAPTVSAKTIAEQLAEKINAKLNYVPLEKQEEEKQEGGQNESFKRYEEELEINDF
PQTARWKVTSKEALHRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKA
KAEITRLIKEELIRLQNSYQPTNKGRYKVL
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgagagtccagatcaacaaagcaacaggtgtccaaacaaaaacaacattatcgg
aagcgctcctcatcacgagggcgctctggtagccgttctaggagtcgttctccatctgac
aaaagagcaaaacgtggagatgatagacgttctagaagtagggacagagatcgcagacgc
gagcgatcacgcagcagagacaagaggagatctcggtcacgtgacaggaagcgtgtgagg
cgttcaagaagtagagagagggaacggagcagagagaggagacgatcacggagtagagag
aggagacgatccagaagtcgaagcagagggagacgatcccgatcttctagccctggcaag
aacaagaaagtagaaaacagatcacgatctaaagaaaaggtagaaggagtggaagttatc
aaggagaagaaaaaggagaaagaagacaaagaagaagaaaaggataaagatgttagcaat
tttgatcagaacaaactggaagaggaaatgagaaaacgaaaagagagagtggagaaatgg
agagaagaacaacgtaagaaagcaatggaaaatataggagaactgaaaaaagaaattgaa
gaaatgaagcaaggaaagaaatggagcttagaagatgatgatgatgatgatgaggaaact
gcagaaggggagaaggaaggtaatgagattgaagatgaagaactggatccattagatgca
tacatggaagaagtcaaagaggaggtcaagaaatttaatatgaggagtgtaaaaggtgga
ggtggaagtgaaaaaaaaactgggccaaccgttactaaagtagtaactgtggttaaaaca
aaaaaagcgtctccagagacagaaaagaaaaaaggcgagctcatggtgaacgaccaagat
gcaatggagtattcctctgaagaggaggaagttgaccttcagactgcattaacaggctat
cagaccaaacataggaaactgctggaaccagttgatcatgggaagattgaatatgagccc
tacaggaaaaacttctatgttgaagttccagaactagctaaaatgactcaagaagaggtg
aatgcatatagactggaattggaaggaattactgtcaagggtaaaggatgtcctaagcca
atcaaaacttgggtgcagtgtggcatttctatgaaaatactgaattccctgaaaaagcat
gggtatgaaaaacctacccccatccaggctcaggctatacctgcaattatgaatggacgt
gatttaattggcatagctaaaacaggaagtgggaagactattgcttttctgttgcccatg
ttcaggcacattatggatcagaggcaattagaagaaggagaaggtccaatagctgtcatc
atgactcctactcgagagctggctttacagattacaaaggagggtaagaagttctcaaag
acgcttgggcttcgagttgtgtgtgtatatggaggaacaggaataagtgaacagattgct
gaactgaaaagaggtgctgaaataattgtttgcacacccggtcgtatgattgacatgtta
gcagctaataatggtcgggtgacaaatcttcggagagtgacatatgttgtccttgatgaa
gctgatagaatgtttgacatgggctttgagcctcaggtaatgcgcattgtagacaatgta
aggcctgatcgccagactgttatgttctctgctaccttccctagagctatggaggcttta
gctcgtcgaattttaagcaagccaattgaggtccaggttggtggcaggagtgttgtctgt
tctgatgtagaacagcaagtgattgtcatagaggaagataacaagttcttgaagctgctt
gaactcctgggacattatcaggaaaaaggagctgtcatcatttttgtagataagcaagaa
catgctgatggattactgaaagacttaatgagagcctcttatccctgcctgtcacttcat
ggaggtattgatcagtatgatagagacagcataatcaatgattttaagagtggagtctgc
aaacttcttgtggccacatctgtagcagcccgaggccttgatgtaaaacaccttgtgctt
gttatcaactacagttgtcccaatcattatgaggattatgtacacagggcaggtagaact
ggacgagcaggcaacaaaggatatgcatatactttcattactgaagatcaagcacgatat
gcaggtgatataattaaagctctggagttgtcaggtactccagttcctgcagagttggag
aaactttggaatgatttcaaagatcaacagaaggctgagggaaagacaattaaaaagagc
agtggtttctctggcaaagggttcaaatttgatgaaacggaggaggctttggctaatgag
cgaaagaaactacaaaaagcagcacttggcttgcaagattctgatgatgaggatacagca
gttgatattgatgaacagattgaaagcatgttcaattcaaagaaaagagttaaggacatg
gcatcatcaggcggaacatctaatgttcctgccccaactgctggaaatgcagaaaaatta
gaaattgctaagaggttggcattgagaatcaatgcacagaagaatcttggagccgaggca
caagtattggtctcttttcaatttaaggatgtgatgcagcaagcgacaaacgctatcctg
agaggtggtacaattcaagctccaactgtgtctgctaaaaccatagctgagcagctggct
gagaagatcaatgccaagctcaattatgtgccgttagagaaacaagaggaggaaaaacag
gaagggggacaaaatgagtcttttaagagatatgaggaagaattggagatcaatgacttt
ccacagactgctaggtggaaggtaacgtcaaaggaagcactgcacagaataagtgaatat
tctgaagccgccattaccatcagaggaacatattttcctccaggcaaagagcccaaggag
ggagaacgaaaaatttacttggccatagagagtgccaatgaattagctgtgcagaaagca
aaagcagaaatcactagactcatcaaagaggagctcatcagattgcaaaattcataccaa
ccaaccaacaaaggaagatacaaagttttataa
DBGET
integrated database retrieval system