Grimontia kaedaensis: K6Q96_02630
Help
Entry
K6Q96_02630 CDS
T09175
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
gkd
Grimontia kaedaensis
Brite
KEGG Orthology (KO) [BR:
gkd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gkd03016
]
K6Q96_02630 (truD)
Enzymes [BR:
gkd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
K6Q96_02630 (truD)
Transfer RNA biogenesis [BR:
gkd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K6Q96_02630 (truD)
Prokaryotic type
K6Q96_02630 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
USH02951
LinkDB
All DBs
Position
I:530140..531198
Genome browser
AA seq
352 aa
AA seq
DB search
MTDVMNALAYLHGQPTATGRLKAKAEDFFVSETLDFTPAGHGEHFLVRIRKIGENTKYVA
NELAKACGVKSRDVSWAGLKDRHAVTEQWFSVHLPGQPDPDLTEFVATHEGVDAILDTAR
HDKKLRPGDLIGNRFKLVITEFEGDDAIEARLADIRDQGVPNYFGSQRFGRNGNNVSSAR
DWGQDKFRVRDKSKRSFYLSAARSFLFNQVLSARIEKQLCHTPMLGDLLIDDKEQVQVVE
DIASAEAQLQRHEWQISGPMTGDNALPTQGEAQQFEQKIVDTEPHLLAVIRGNRMRHERR
PLLLYPQEMSWQREGDTLTIDFSLPAGCFATAVMREVMEDKSEGESDAHFDQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgtaatgaacgctctggcttacctgcatggtcagccaacagcaactggccgc
ttaaaggccaaagcagaagatttcttcgttagcgaaacactggattttacgcctgccgga
cacggagagcattttctggtacgtatccgcaagattggcgagaacactaaatacgtggcc
aatgaactggctaaagcgtgtggtgttaaatcccgtgatgtgagctgggctggtctgaaa
gatcgccatgcagtgacagaacaatggttcagtgtgcacctaccaggacaacctgatcct
gatttgactgaatttgtggcgacacatgaaggtgttgacgccattttggataccgctcgt
cacgacaaaaaactgcgcccgggtgacctgattggtaaccgctttaagttggtgatcaca
gaatttgaaggtgatgacgcgattgaagcgcgccttgccgacattcgcgaccaaggtgta
ccaaactactttggcagccaacgatttggtcgtaatggcaacaacgtgtcatcagcgcgc
gattggggtcaggataaattccgagtacgtgataagagcaaacgcagcttttacctgtct
gcagctcgatcattcctgttcaaccaagtgttgtctgcgcggatcgaaaagcaactttgc
catacgccaatgttgggcgacttactgatcgacgacaaagagcaggtccaggtggtagaa
gacattgcctctgcggaagcacagttgcaaagacacgaatggcaaatctctggcccaatg
accggtgataatgcactgcctactcaaggtgaggcacagcagtttgaacagaaaatcgta
gatactgaacctcatctactcgctgtgattcgtggtaaccgcatgcgtcacgagcgtcgt
cctttgctgctctatcctcaagagatgagctggcaacgtgaaggtgacacattaacgatt
gatttctctttacctgcaggatgctttgcaacagcggtgatgcgagaagtcatggaagac
aaatcagagggagaatcagatgcacattttgatcagtaa
DBGET
integrated database retrieval system
