Geobacter metallireducens: Gmet_3235
Help
Entry
Gmet_3235 CDS
T00295
Symbol
hemD
Name
(GenBank) uroporphyrinogen III C2,C7-methyltransferase and uroporphyrinogen III synthase
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
gme
Geobacter metallireducens
Pathway
gme00860
Porphyrin metabolism
gme01100
Metabolic pathways
gme01110
Biosynthesis of secondary metabolites
gme01120
Microbial metabolism in diverse environments
gme01240
Biosynthesis of cofactors
Module
gme_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Gmet_3235 (hemD)
Enzymes [BR:
gme01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
Gmet_3235 (hemD)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
Gmet_3235 (hemD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
ABB33448
UniProt:
Q39QM6
LinkDB
All DBs
Position
3640496..3642037
Genome browser
AA seq
513 aa
AA seq
DB search
MPDKSLKKPFVHLIGAGPGDPGLITVKGRESLGRADVVIYDYLANDDLLRFARPDAELIY
AGKIGGHHNREQWQINALLVEKALAGNVVARLKGGDSFVFGRGGEECEALVAAGIPFEIV
PGVTAGIGVTAYAGIPLTHRGVTTSVTFVTGHEGHDKEVSQIDWEGLSLGSGTVVFYMGI
KNLPQITANLMAHGRPPETPVALIRWGTRPEQEVLTGTLADIAEQARRTGFRAPAITVVG
EVVRLREKLRWFDNRPLFGTSILVTRAADQAGEFGAMLGALGARVLECPTIAIVPPESWD
NLDAAIASLDRFHWAVFTSVNAVRFFFERLAAAGKDSRALGNCRVCAVGPKTAAALAPFG
IRPDLIPADYKGEGVVEVFRSEEIAGKRIIFPKGDRARDVIPQGLAELGGEVTAPVAYRN
VTPDSLPAGVIAELEERRITCVTFTSSSTVENLAAILGENRFLHLLKGVTIAAIGPITAR
TCRELGLEVHVEPSKYTLAAMTDALVDFFSRSK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcccgataaatccctcaaaaaaccgttcgtccacctcatcggtgccggccccggcgac
ccggggctcatcaccgtcaagggtcgggagtccctgggaagagccgacgtggtcatctac
gactacctggccaatgacgacctcctccgcttcgcacggcccgacgccgagctgatctac
gccggcaagatcggcgggcaccacaaccgcgagcagtggcagatcaacgcgctcctggtg
gaaaaggccctggcggggaatgtggtggcacgactcaaggggggtgactcctttgtcttc
ggccgggggggtgaggagtgcgaggcccttgtggcggcgggaatcccctttgagatcgtc
cccggcgtcacggccgggatcggcgtcactgcctacgccggcatccccctcactcaccgg
ggggtgaccacttccgtcaccttcgtcaccggccatgaggggcacgacaaggaggtctcc
cagatcgactgggagggtctctccctggggagcggcaccgtagtcttctacatggggatc
aagaacctcccccagataacggcaaacctcatggcccacggcaggccgccggagaccccg
gtcgccctcatccgctgggggactcggcccgagcaggaagtactcaccggcaccctggcc
gacatcgccgagcaggcacggcggaccggcttccgggccccggccatcaccgtggtggga
gaggtggtgcgcctgcgggagaagctccgctggttcgacaaccgtcccctcttcggcaca
agcatcctcgttacccgtgccgcggaccaggcaggcgagttcggtgccatgctcggggca
ctgggggcccgggtcctggagtgccccaccattgccattgtcccccccgaaagctgggac
aacctcgacgcagccatcgcctctctggatcggttccactgggccgtcttcacgtcggtc
aacgcggtccgtttcttctttgagcgactcgccgcagccggaaaggactcccgcgccctg
gggaactgccgcgtctgcgccgtggggcccaagacggcagcagccctggcccccttcggc
atccgaccggacctcattccggccgactacaagggtgaaggggtggtggaggtgttccgc
tcggaggagattgcagggaaacggatcatcttccccaagggagaccgggccagggacgtg
atcccccagggcctcgcggagctggggggagaggtgaccgcgccggtcgcctaccgcaac
gtgacgcccgactcccttcccgccggcgtcatcgccgagctggaagaacggcgcatcacc
tgcgtcaccttcacctcgtcatccaccgtggagaacctggccgccatcctcggggagaac
cgcttcctccacctcctgaagggggtgacgatcgccgccatcggcccaatcaccgccaga
acctgccgggaactggggcttgaggttcacgtggagccctcgaagtacaccctcgctgcc
atgacggacgccctcgtcgactttttttcacggtcgaagtag
DBGET
integrated database retrieval system
