Glutamicibacter mishrai: NMP99_02570
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Entry
NMP99_02570 CDS
T08378
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gmi
Glutamicibacter mishrai
Pathway
gmi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMP99_02570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmi03019
]
NMP99_02570
03400 DNA repair and recombination proteins [BR:
gmi03400
]
NMP99_02570
Enzymes [BR:
gmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NMP99_02570
Messenger RNA biogenesis [BR:
gmi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NMP99_02570
DNA repair and recombination proteins [BR:
gmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NMP99_02570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HTH_IclR
zf-TFIIB
AAA_30
HEM4
MRFAP1
Motif
Other DBs
NCBI-ProteinID:
UTT40217
LinkDB
All DBs
Position
547991..550099
Genome browser
AA seq
702 aa
AA seq
DB search
MQVDLKTLALQKLRALVQNPEAQFHDGQYEAIEALVAQRRRALVVQRTGWGKSAVYFIAS
LLLREQGYGPTLIVSPLLALMRDQVAAAERAGVRAAAINSANVLEWREILEKLQRNEIDV
LLVSPERLNNPSFREQQLPMLMQRLGLLVIDEAHCISDWGHDFRPDYRRIRDLIARLPQG
LPVLATTATANSRVVEDVAEQLAGGTEQVFTLRGTLARDSLRLGVLRLPSPRMQLAWLLS
HINDFKGSGIIYTLTVSAAEDIARLLREAGHEVASYTGRTDLEERERLEQALKNNEVKAL
IATSALGMGFDKPDLGFVLHVGAPSSPVAYYQQVGRAGRGSINADVLLLPGPDDSEIWEY
FATSSMPDQVRATQVLEALGGTDGAMSVPALESAVNLRRSPLELLLKVLAVDGAVERVAG
GWMRTDMPWTYDADRYKRVAQSRIHEQNLMVNYENTRGCRMQFLTEALDDPRSVACGRCD
NCAGVWFDDHIPEDSKDSAQAALGRVGIPIEPRKLYPSGLDRLGYSLKGKIPVDEQLANG
RALARLTDLGWGNRLRQLFADPADQPIDKAMLDACVKVLAEWNWEERPVGVVAMPSNKRP
QLITSLAQSLAEVGRLRYLGQLEYRGAGPQNGSGGNSAFRVAAVADAFELPAALEQLVAG
APGPILLVDDLADSRWSLAMAGRALRIAGAPGVLPFTLGVAG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtggatctgaaaactctcgcgctgcagaaattgcgcgccctggtgcaaaacccg
gaggcccagttccacgacgggcagtatgaagcgatcgaagccctagtcgcccaacgccgt
cgcgccttggtggtccagcgtaccggctggggcaagtcggcggtgtacttcatcgcatcc
ctgcttttgcgggaacagggctacggacctaccctgatcgtctccccgctcttggcattg
atgcgcgaccaggtggccgccgccgaacgggccggggtgcgagccgctgccatcaactct
gccaatgtgcttgaatggcgcgaaattcttgagaagctgcaacgcaacgagatcgatgta
ttgctggtgtctcccgagcggctgaacaacccgtcattccgggaacagcagctgcccatg
ctgatgcagcgcctggggctgttggtgatcgatgaagcccactgcatttcggactggggc
cacgatttccgtccggactaccgccgtattcgcgatctgattgcccggctgccccaaggc
ctgccagtgctcgccaccaccgcaacggctaacagccgcgtggtcgaagacgtcgcggaa
caacttgccggcgggacagagcaggtcttcaccctgcgcggtaccctggcccgtgattcc
ttgcggctgggggtgcttcgcttgccctctccgcgaatgcagctggcctggctgctcagc
cacatcaacgatttcaaaggctccggcatcatctatacgctcacggtgtcggcggccgaa
gacatcgccaggctcttgcgggaagccgggcatgaggtggcttcctacaccgggcgcacc
gacttggaagaacgcgagcggctggaacaagccctgaaaaacaatgaggtcaaggcgctg
attgccacaagcgcattgggcatgggattcgacaagccggatctgggcttcgtgttgcac
gtaggcgcgccgagctcgccggtggcttattaccagcaggtgggccgtgcaggccgtggc
agcatcaacgccgacgtgctcctgctgcctggacccgatgattcggaaatctgggagtac
ttcgccaccagttccatgccggaccaagtccgtgccacacaggtgcttgaagccctaggc
ggcactgatggcgccatgagtgttccggcgttggaaagcgcggtgaacttgcgacgttcg
cctttggaactgttgctgaaagtcctggccgtcgatggggcagtggagcgcgtagccggc
ggttggatgcgcaccgacatgccatggacctacgacgcggatcgctacaagcgcgtggct
caaagccggatccacgagcaaaacctgatggttaattacgaaaacacccgtggctgccga
atgcagttcttgactgaagcgctggatgacccacgctctgtggcctgcgggcgttgcgat
aactgtgccggcgtgtggttcgatgaccatattccagaagattccaaggacagcgcgcaa
gctgcgttgggccgggttggcatcccgatcgagcctcgcaagctctacccttcgggactg
gaccggctgggctattcgctcaaggggaagatccccgtggatgagcagctggccaacggc
agggccttggccaggttgaccgacctcgggtggggcaaccgcttgcgccagctcttcgct
gatcccgccgaccagccaatcgacaaggcgatgcttgatgcgtgcgtcaaggtgctggcg
gagtggaactgggaagagcgcccggtaggcgttgttgccatgccatcgaataagcggccg
caactgatcacctccttagctcaaagcttggccgaggtgggccggttgcgctatctcggg
cagctcgaataccggggtgccggaccgcaaaacggctccggaggtaactcagcgttccgc
gtagcggcggtagccgatgcctttgagcttccagctgccctggagcaactggtggccggt
gctcccggtccgattttgctggttgatgacctcgcggattcgcgctggtcactggcaatg
gccggtcgcgccttgaggattgccggtgcgccgggtgtcctgcctttcactttgggcgta
gcagggtaa
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