Girardinichthys multiradiatus (darkedged splitfin): 124868455
Help
Entry
124868455 CDS
T08099
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmu01009
]
124868455 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124868455 (hdac6)
04131 Membrane trafficking [BR:
gmu04131
]
124868455 (hdac6)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124868455 (hdac6)
Enzymes [BR:
gmu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
124868455 (hdac6)
Protein phosphatases and associated proteins [BR:
gmu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124868455 (hdac6)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
124868455 (hdac6)
Membrane trafficking [BR:
gmu04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
124868455 (hdac6)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
124868455 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
124868455
NCBI-ProteinID:
XP_047221724
LinkDB
All DBs
Position
1:48806207..48826144
Genome browser
AA seq
1097 aa
AA seq
DB search
MPSELDPPGSGVKSVRRSPRLSPQAVSEKQKGGGGGSLQEVKKRGRMRSREEQQEEELSS
RLKTLDLSSRSAVSGTGLVYSEIFTHHQNLWDLSHVERPDRVTFIMSELQRQKLLSLCVT
VEPREATEEELLLVHTKHYIDAVKSTQTMTQTELQSLSERYDSVYLHPESFQVCVTAVGS
VLQLVDRVMTSELRTGFAVTRPPGHHAQANQPNGFCVFNNVAIAARYAQKRHAVSRVLIV
DWDVHHGQGIQYLFQGDSSVLYFSVHRFEGGSFWPHLPESNSSFVGSGRAEGRNINLPWN
KTGMTDADYIAAFQQVLLPIAYEFQPQLVLVSAGFDAAAGDPKGEMCVSPQCFHILTHML
MSLAEGRLVLALEGGYDLQATAEGVASCIRALLGGACPPLNPPTAPSDSALQSISQTISA
LYPHWASLRVLTGSMTEGPVRATANHRSPSPASLNTSVAKTTGLVYDEKMMEHVNLWDRH
HPEQPQRIFKIFSKHQQLGLVDRCHRIPARLATEEELAMCHSLQHIEQMKSTAEMKPRDL
HILGNEFTSIFISNQSFQCARLAAGSCFNAVDSILTGQVSNGVAIIRPPGHHAERDAPCG
FCLFNTAALTARYAQKNSHDPQLRILILDWDVHHGNGTQHMFENDNSVLYISLHRYDNGT
FFPFSQDAAPDRVGVAEGAGYNVNVAWNGGRMGDSDYLAAFHHVVMPIAAEFNPGLVLVS
AGFDAARGDPLGGYHVTPEGYAHLTHMLMSLAGGRVLILLEGGYNLTSISDSMAMCTSVL
LGDPPPSLVVPLPPPHHCAMATISDVIRQQAPYWQSLRIKIPESVRAGVPSPKHRGKRSS
QDRKSDKQSLPAAGEEVSTTEHGLAELMQGLASLDICQTSVNQSPLEPTPTPLETATIKV
KGDMKSESENSQSAGTMQSQTVAVAAPELDPAGMGPKAREARVDSGRGQEPCEGENEPAA
EGACGWSKPQVSLELTCSTEMGGDTLYVVDPLAWCPHLDAVKAFPHSGIDVFQPCGDCGS
DTENWICLTCYQVCCGRYVNEHMVIHGATLEHPMVLSFSDLSVWCYLCESYVHHQVLFEA
KNAAHISKFGEEVPPWS
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgccatcagaattggatcctccaggatccggagtgaaatcagtcaggagatctcctcgc
ctgtcaccacaggctgtcagcgagaagcagaagggaggaggaggaggcagcctgcaggag
gtgaagaagaggggaaggatgaggagcagagaggagcagcaggaggaggagctgagcagc
aggctgaagacactggatttgtccagcaggtctgcagtcagtggaaccggactggtttac
tcagagatcttcacacatcatcagaacctgtgggatctcagccatgtagagcgtcctgac
agagtgacgttcatcatgtcagaactgcagaggcaaaagctgctgagtctctgtgtcact
gtggagcccagagaagctacagaggaagagctgctgcttgttcatacgaaacattacata
gatgctgtaaagtcaactcagacgatgacccagactgagctgcagagtctttctgagaga
tatgactcagtctacctccatccagagtccttccaggtctgtgttacagccgttggttca
gtcctccagctggtagatcgagttatgacctctgaacttaggaccggatttgctgtcacc
agacctccaggtcaccacgctcaggccaaccagcccaacgggttctgtgtgttcaacaac
gtggcaatcgcagctcgatacgctcagaaacggcacgctgtcagcagagtgctgattgtg
gactgggacgtccatcatggtcagggcatccagtacctgttccaaggggattccagtgtc
ctgtacttcagcgtccacaggtttgaaggcgggtccttctggcctcacctgccggagtca
aactccagctttgtcggcagcggacgagctgaagggagaaacatcaacctgccttggaac
aagaccgggatgaccgacgctgattacatcgctgcattccagcaagtgctgctccccatc
gcctatgagtttcagcctcagctggttctggtctcagctggattcgatgctgcagccgga
gatccgaagggggagatgtgtgtgagtcctcagtgtttccacatcctgacccacatgttg
atgagtttggccgaaggtcgactcgttctcgctctcgagggaggttatgacctgcaggcg
acggcagagggcgttgcatcctgcatcagagctctgctgggcggagcctgtcctcctctg
aacccgcccactgctccctctgacagtgctctgcagtccatctctcagaccatctcggct
ctgtacccacactgggcctcgctgcgggttctgactggatccatgactgaggggcctgtc
agagcaacagccaatcacaggagcccaagtccagcttctctcaacacgtctgttgccaaa
acaacaggtctggtctatgatgagaagatgatggagcacgtgaacctctgggacagacat
caccctgaacagcctcagaggatctttaagatcttctccaaacaccagcagctgggtttg
gttgatcgttgccatcggataccagctcgcctggcgacagaggaggagctggccatgtgt
cacagtttgcagcacatcgagcagatgaagtcgacagcagagatgaagcctcgagatctt
catatacttggaaacgagttcacctccatcttcatcagtaaccagagcttccagtgtgcc
cggctggctgctggaagctgctttaatgctgtggacagcatcctgactggccaggtgagc
aacggcgtggccatcatccgtcccccgggtcaccatgctgagagagatgctccctgcggg
ttctgtctcttcaacacggcagcactaactgctcgctatgcccagaaaaactcccatgat
cctcagctgcgaatcctgatccttgactgggatgttcaccatggcaacgggactcagcac
atgtttgaaaatgacaacagcgtactgtacatttctctccatcgctacgacaacgggacg
ttcttcccgttctcgcaggacgctgcccctgatagggtgggcgtggccgagggtgcaggt
tataatgtaaatgtggcgtggaacggaggacgaatgggcgactccgattacctggcagcc
tttcatcatgttgttatgccgattgctgctgagtttaaccccggactggttctggtgtca
gctgggttcgatgcagctcggggagatccgttgggaggatatcatgtgactccagaagga
tacgcccacctcacacacatgctgatgtcattggctggggggcgtgtcctcatcttactg
gagggaggttataacttaacatccatctctgactccatggcaatgtgcaccagcgtgttg
ctaggagaccctcctccatccctggtggtgcccctcccccctcctcatcactgcgccatg
gcaacaatcagcgatgttatccgacagcaagccccctactggcagtccctgaggatcaaa
attccagaatcagtacgtgcaggtgttccctccccaaagcatcgtgggaagcgaagttct
caagacagaaagtcagacaaacagtcactccctgctgctggagaggaggtctctacgaca
gaacatggtctggcggagctcatgcagggattggccagtctagacatctgtcaaacgtca
gtaaatcagtccccgctcgagcctacccccaccccactggaaacagccacaataaaggtc
aaaggtgacatgaagtctgagtctgagaacagccagtcagcagggacaatgcagtctcag
actgttgccgtggcagcaccagaattggatccagcagggatgggccctaaagcaagggaa
gcaagggtggattcaggaagagggcaggagccttgtgaaggagaaaatgagcctgcagca
gagggagcctgtggttggtccaagcctcaggtgtctctggagctgacatgcagcactgag
atgggcggagacactctatacgtggtggaccctctggcctggtgtcctcatctggatgct
gttaaggcatttcctcactcaggtatagatgtcttccagccttgcggagactgcggttct
gacactgagaattggatctgcctgacctgctaccaggtgtgctgcggccgttatgttaat
gaacacatggttatacatggcgccacgctggaacacccgatggtcctcagcttctcagat
ctgtctgtgtggtgctacctgtgtgagtcctacgtccaccaccaggttctgtttgaggcc
aaaaatgctgctcacatctccaagtttggagaggaggtccctccatggagctga
DBGET
integrated database retrieval system
