Glycine max (soybean): 547543
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Entry
547543 CDS
T01710
Name
(RefSeq) polygalacturonase PG2 precursor
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00040
Pentose and glucuronate interconversions
gmx01100
Metabolic pathways
Module
gmx_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
547543
Enzymes [BR:
gmx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
547543
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
547543
NCBI-ProteinID:
NP_001238104
UniProt:
Q9SWS2
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Position
5:511288..515500
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AA seq
439 aa
AA seq
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MNMKLNTIALIIGIAFSVWSSSCTAARVSHWRKLKAAYATTFNVLDYGAKGDGHADDTKA
FQNAWVAACKVEGSTMVVPSGSVFLVKPISFSGPNCEPNIVFQLDGKIIAPTGSAAWGSG
TLQWLEFSKLNKITIRGKGVIDGQGSVWWNNDSPTYNPTEVMLESNGRLPSTKPTALRFY
GSDGVTVTGITIQNSQQTHLKFDSCTNVQVSGISVSSPGDSPNTDGIHLQNSQNVVIYSS
TLACGDDCISIQTGCSDIYVHNVNCGPGHGISIGSLGRENTKACVRNVTVRDVTIQNTLT
GVRIKTWQGGSGSVQNIMFSNVQVSGVQIPILIDQYYCDGGKCRNESSAVAVSAIHYVNI
KGTYTKQPIYFACSDNLPCTGITLDTIRLESAQETKNSNVPFCWEAYGELKTKTVPPVEC
LQRGNPSKAGGINSKIDSC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaaactaaacaccattgcattgatcattggcattgcattttctgtgtggtct
tcaagctgcacagctgcacgagtcagccactggaggaaactcaaagctgcctatgctaca
acttttaatgtgttagactatggtgctaaaggtgatggacatgcagatgatacaaaggcc
tttcaaaatgcatgggtagctgcttgtaaggtggagggctcaacaatggttgttccatct
ggttctgtatttttggtgaaaccaatctctttctcaggccctaattgtgagccaaacatt
gtttttcagttggatggcaaaatcattgcacctacaggctctgcagcttggggatctggt
accttgcaatggcttgaattctcaaagcttaacaagattacaatcagaggcaaaggtgtc
attgatggtcaaggctctgtttggtggaataatgactctcccacttacaatcccacagaa
gtgatgctggaaagcaatggaagacttcctagcacaaaaccaacagcactcaggttctat
ggaagtgatggtgtaacagtcacaggcataacaattcagaatagtcaacaaacccatctc
aagtttgactcttgcacaaatgttcaagtctctggcattagcgtttcatcacctggtgat
agccccaacactgatggaattcacttacaaaattctcaaaacgtggttatctatagcagc
acacttgcttgtggtgatgactgtatctctatacaaactggttgctcggacatatatgta
cacaatgtcaattgtgggcctggccatggaatcagcattggaagtcttggaagagagaac
accaaagcctgtgttagaaatgtcaccgtccgagatgttactatccaaaatactctcact
ggtgtcagaattaaaacatggcagggtgggtctggctcggtccaaaacatcatgttctcc
aatgttcaagtttctggggttcaaattccaattttgatcgaccaatactattgtgatggt
ggcaagtgtaggaatgaatcatcagctgtggcagtgtcagccatacattatgtgaatata
aagggaacatacactaagcagcctatttattttgcatgtagtgacaacttaccttgcact
ggcataacccttgataccatacggctagaatcagcccaagaaactaaaaattccaatgtt
ccattttgttgggaagcatatggggagttgaagaccaaaacagtccctcccgttgaatgt
cttcagagaggaaacccatcaaaagcaggtggaatcaattctaaaattgattcttgctaa
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