Glutamicibacter nicotianae: QQS42_02445
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Entry
QQS42_02445 CDS
T09135
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gnc
Glutamicibacter nicotianae
Pathway
gnc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gnc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QQS42_02445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gnc03019
]
QQS42_02445
03400 DNA repair and recombination proteins [BR:
gnc03400
]
QQS42_02445
Enzymes [BR:
gnc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QQS42_02445
Messenger RNA biogenesis [BR:
gnc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QQS42_02445
DNA repair and recombination proteins [BR:
gnc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QQS42_02445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HTH_IclR
zf-TFIIB
HEM4
AAA_30
MRFAP1
Motif
Other DBs
NCBI-ProteinID:
WIV44499
LinkDB
All DBs
Position
498269..500389
Genome browser
AA seq
706 aa
AA seq
DB search
MDGSTQVDLKTLALQKLRALVQNPDAQFHDGQYEAISALVAQRRRALVVQRTGWGKSAVY
FIASLLLREQGYGPTLIVSPLLALMRDQVAAAERAGVRASAINSANVLEWREILEKLQRN
ELDVLLVSPERLNNPSFREQQLPMLMQRLGLLVIDEAHCISDWGHDFRPDYRRIRDLIAR
LPQGLPVLATTATANSRVVQDVAEQLAGGTEEVFTLRGTLARDSLRLGVLRLASPRMQLA
WLLSHIEDFKGSGIIYTLTVSGAEDIARLLKDAGHEVAAYTGRTDLEERERLEQALKNNE
VKALIATSALGMGFDKPDLGFVLHVGAPSSPVAYYQQVGRAGRGSVNADVLLLPGPDDSE
IWEYFATSSMPDQERATQVLEALAKADGAMSVPALESAVNLRRSPLELLLKVLAVDGAVE
RVAGGWMRTDMPWTYDADRYKRVAQSRVHEQNLMVSYENTRGCRMQFLTDALDDPQSAPC
GRCDNCAGVWFDDHIPDDSKDSAQAALGRVGVPIEPRKLYPSGLDRLGYALKGKIPVDEQ
VAMGRALARLTDLGWGNRLRQIFADPADNPIDKAMFEACIKVLAEWNWEERPVGVVAMPS
NKRPQLITSLAQGLAEVGRLRYLGQLEYRGPGPQNGPGGNSAFRVAAVADAFELPTQLEQ
LNANAPGPVLLVDDLVDSRWSIAMAGRALKIAGAPGVMPFTLGVAG
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggatggctcaacgcaagtggatctgaaaacgctggcactgcagaagctgcgcgccctg
gtgcaaaacccggacgcgcagttccatgacggacagtatgaagcgatcagcgcgctggtg
gcccagcggcgccgtgcactcgtcgtccagcgcaccggctggggcaaatccgcggtgtac
ttcatcgcttccctgctgctgcgcgaacagggctacgggccaacactgatcgtttcgccg
ctgctggccctgatgcgcgaccaggtcgcggccgcggagcgtgcgggcgtccgcgcctcg
gccatcaactcggccaacgtgctcgaatggcgcgagattctcgaaaagctgcagcgcaat
gagctcgatgtgctgctggtatccccggagcgcttgaacaatccatccttccgcgagcag
cagttgccgatgctgatgcagcgcctgggcctgctggtgatcgacgaagcgcactgcatt
tccgactggggccacgatttccgtcccgactaccgccgcatccgggatctgattgcccgg
ttgccccagggcctgccggtgctggcgactaccgccaccgcgaacagccgagtcgtccag
gatgtggccgaacagctggccggaggcaccgaagaggtcttcacgctgcgcggcaccctg
gcccgcgactcgctgcgcctgggtgtcctgcgcctggcttcgccgcggatgcagttggcc
tggctgctcagccacatcgaggacttcaagggctcggggatcatctacaccctgacggtt
tctggcgcagaggatattgcccgactgctcaaggacgccgggcacgaagttgccgcgtac
accggacgcaccgatctggaagaacgcgaacgccttgagcaggcgttgaagaacaatgaa
gtgaaagcgctgatcgccaccagcgccttgggcatgggcttcgataagccggacctcggc
ttcgtgctgcacgtcggtgcgcccagctcgccggtggcctactaccagcaggtgggccgt
gccggacgtggaagcgtcaacgcggatgtgctgctgctgcccgggcccgacgactcggaa
atctgggaatacttcgccaccagctccatgccggaccaagagcgtgccacccaggtgctc
gaggccctggccaaggccgacggggcgatgagtgtcccggcgttggaaagcgcggtgaac
cttcggcgctcgccgcttgagctgctgctgaaggtcctggcggtggacggcgcagtggag
cgcgtggctggcggctggatgcgcacggacatgccgtggacctatgatgccgatcgctac
aagcgggtggcgcagagccgggtccatgagcagaacctcatggtcagctatgagaacacg
cgtggctgccgcatgcagttcctgaccgatgcgttggatgacccgcagtccgcgccgtgc
ggccggtgcgacaactgcgccggcgtgtggttcgacgaccatattcccgacgactccaag
gacagtgcgcaggcggccttgggccgggtgggtgtgcctatcgagccgcgcaagctgtac
ccctccggactggatcggctgggctacgcgctcaaaggcaagatccctgttgacgagcag
gtggccatgggccgtgcgctggcccggttgaccgacctcggctggggcaaccgcttgcgc
cagatcttcgccgaccctgccgacaacccgatcgacaaggcgatgttcgaggcctgcatc
aaggtgctggccgaatggaactgggaggaacgcccggtgggtgtggtggccatgccatcg
aataagcgcccccagctgatcacctcgctggcccaaggcctggccgaagtaggtcggctg
cgctatctgggccagctcgaatatcgcggtcccggaccgcagaacggtcccggaggaaac
tcggctttccgtgttgccgcggtagctgatgcgttcgaacttccaacccagcttgaacag
ctcaatgccaatgctccagggccggtgctgctcgttgacgacctggtcgattcgcggtgg
tctatcgcgatggctggacgggccttgaagatcgccggcgctccgggtgtcatgcctttc
actttgggcgtagctgggtaa
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