Glaciecola nitratireducens: GNIT_0281
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Entry
GNIT_0281 CDS
T01632
Symbol
nei
Name
(GenBank) endonuclease VIII
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
gni
Glaciecola nitratireducens
Pathway
gni03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GNIT_0281 (nei)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gni03400
]
GNIT_0281 (nei)
Enzymes [BR:
gni01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GNIT_0281 (nei)
DNA repair and recombination proteins [BR:
gni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GNIT_0281 (nei)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AEP28435
UniProt:
G4QF91
LinkDB
All DBs
Position
318363..319187
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AA seq
274 aa
AA seq
DB search
MPEGPEIRLAADQIAKVIENQIIEDIEVGLAHLHSPAQKLKGEKVEEVETRGKAMLIHFC
NGLSVYSHNQLYGVWKVVKRGTLPKTKRSLRLALHTKSNSALLYSASDIAVYERHDLVQH
PFLSKIGPDILNKDLKWESVAERLLDKRFRNRSLSILYLDQHFIAGIGNYLRTEILYAAG
IHPDFKPKQLSPQQLESLARQTLIIGKRAYATKGHTVPKALGEKLAKTKGSYESVRFMAF
NREGLPCRDCVTPIVKAQRNGRRIYWCDLCQLTP
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaggcccagaaatacgcttagccgctgatcaaattgctaaagtaattgaaaat
caaatcatagaagacattgaggttggcttagcgcacctgcattcacctgcccaaaagttg
aaaggcgaaaaagtggaagaggtagaaacacgtggaaaagcaatgttaattcatttttgt
aacgggctgtcagtgtattcccacaatcaactttacggtgtttggaaagttgttaaacgc
ggcacgttgcccaaaaccaaacgttctttgcgtcttgccctgcacaccaaaagcaacagc
gctttgctttacagtgcatctgatattgcagtttacgagcgtcacgatttagttcagcat
ccatttttaagtaaaattggccccgatattctaaacaaggatttgaaatgggaaagcgtt
gcagagcgtttgctggataagcggtttcgcaacagaagcttgtcaatcttgtacctagat
cagcattttatagctgggataggcaactatttacgtacggaaatactttatgccgcgggt
attcaccctgacttcaaaccaaagcagttgagcccacagcagctagagagtctggcaaga
cagacgctaattataggaaagcgcgcgtatgctacaaaaggccatactgtaccaaaagcg
cttggtgaaaagttagcgaaaaccaaaggtagttacgagagcgttcgatttatggctttc
aatcgcgagggcctgccctgtagagattgcgtgacgcctattgtgaaagcgcaacgtaac
gggcgccggatttattggtgtgacctttgccaattgacgccttaa
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