Geomonas nitrogeniifigens: KP003_00450
Help
Entry
KP003_00450 CDS
T07937
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
gnt
Geomonas nitrogeniifigens
Pathway
gnt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KP003_00450 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gnt03400
]
KP003_00450 (recD)
Enzymes [BR:
gnt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KP003_00450 (recD)
DNA repair and recombination proteins [BR:
gnt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KP003_00450 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
UvrD-helicase
Helicase_RecD
RecD_N
AAA_22
SLFN-g3_helicase
AAA_16
nSTAND3
UvrD_C
NTPase_1
T2SSE
AAA_28
Herpes_Helicase
AAA_17
Motif
Other DBs
NCBI-ProteinID:
QXE86912
LinkDB
All DBs
Position
complement(110216..112018)
Genome browser
AA seq
600 aa
AA seq
DB search
MTPEGVQLNDIDRQFAAFICRLAGSRDQHLEAAAALLSRGVTAGDVCLDLDTALEDGRAA
GFRLESAATWCDRLKASPAVGAPGEFKPLILDPTGRLYLQRYWRYENELAEAILNRGEPA
PFDREQLRQGLARLFPPTQGETDWQRLAALAAVTRRFCVISGGPGTGKTTTVVKVLSLLL
EQAQAAGAGSTLRIALAAPTGKAAARLKESISGGVDKADPAVRELIPEEVFTLHRLLGYL
KGSSGFRHNSDNPLPYDVVIVDEASMVSLPLMAKLVCALRQDTRLILLGDRDQLASVEAG
AVLGDMCDTGGAHGFSPEFAKLAADVAGDAVEVQPGLGPLGDAVVLLQKSYRFSSAGGIG
RVAALVNAGDAQGALAASIDPALADVSLASLPPAAGLAEALAKRITDGYCAYLAEETPEE
AFEQFSRFRILCAMRSGPYGVEGINQLVRQRLAQAGLIHPHGRWYAGEPVMITRNDYNLG
LFNGDVGLILPDAENGGELRAFFPSGSGGMRKVLPLRLPEYECAFAMTVHKSQGSEFEKV
LLVLPDRDNPVLTRELLYTAITRAKKSAEVLATNDLFLTSVERRVVRRSGLRGRLWGTTA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgactcctgaaggagttcaactcaacgacatagacaggcagttcgccgcgttcatctgc
cgcctggcggggagccgcgaccagcacctggaggcggccgccgcgctgttgagccgtggg
gttaccgcgggcgacgtctgcctcgatctcgacaccgcgctggaggatgggcgtgctgca
gggttccgcctggaatcggcggcgacctggtgcgaccgactgaaagcctcgcccgcagtc
ggcgcccccggggagttcaaaccgctcatactggaccccacgggccgcctctacctgcag
cgctactggcgctacgagaacgaactggccgaggcgatcctgaaccggggagaaccggcg
ccgtttgaccgcgaacagctgcgccaggggctcgcgcgcctgttcccccccacgcagggc
gagaccgactggcagcgcctcgccgccttggccgcggtcaccaggcgcttctgcgtcatc
tccggcggacccggaaccggcaagaccacgaccgtggtcaaggtgctctccttgctgctg
gagcaggcccaggccgccggagccgggagcaccctccgcatcgccctggcggcccccacc
ggcaaggccgccgcgcgcctcaaggaatcgatctccggaggggtagacaaggccgatccg
gcggtacgcgagctgatcccggaggaggtcttcaccctgcaccggctgctcggttacctc
aagggttccagcggcttccgccacaacagcgacaaccccctcccctacgacgtcgtcatc
gtcgacgaggcgtcgatggtctccctgccgctcatggcgaagctggtctgtgcgctgcgg
caggacacccgcctgatcctcctgggtgaccgggaccaactcgcttccgtcgaggccggc
gccgttctgggcgacatgtgcgacaccggcggcgcgcacggtttctcccccgaattcgcg
aaactcgccgcagacgtggcaggtgacgcggtcgaggtccagcccgggctcggcccgctc
ggcgacgcggtcgtgctgctgcaaaagagctatcgcttctcgtccgcagggggcatcggc
agggtcgccgccctggtcaacgcgggtgacgcccaaggcgccctggcggcctcgatagac
cccgcccttgcggatgtctcgctggcctcgctcccccccgccgccggccttgccgaggcc
cttgccaagcgcatcaccgacggctactgcgcctacctggcggaggaaacgccggaggag
gccttcgaacagttcagccggttccgtatcctgtgcgccatgcgcagcggcccgtacggg
gtcgaggggatcaaccagctggtgcggcagcgactggcacaggccgggctgattcatccc
cacggacgttggtacgccggcgaaccggtgatgatcaccaggaacgactacaacctgggg
ctgttcaacggcgacgtgggcctgatcctccccgacgccgagaacggcggagagctgcgc
gccttcttcccttccggttccggggggatgaggaaggtgctgccgctcaggctccccgag
tacgagtgcgcgttcgccatgaccgtgcacaagagccagggctccgaattcgagaaggtg
ctcctggtcctccccgaccgcgacaacccggtgttgacgcgggagctgctgtacaccgcc
atcacccgtgccaaaaagtcagcggaagtgctcgccaccaacgacctcttcctgaccagc
gtggagcggcgggtggtcagaaggtccggcctgcgcggccgtctctggggaaccacagcc
tga
DBGET
integrated database retrieval system
