Gordonia sp. YC-JH1: CXX93_03350
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Entry
CXX93_03350 CDS
T05256
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
goc
Gordonia sp. YC-JH1
Pathway
goc03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CXX93_03350 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
goc03032
]
CXX93_03350 (dnaB)
Enzymes [BR:
goc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CXX93_03350 (dnaB)
DNA replication proteins [BR:
goc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CXX93_03350 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
TniB
Motif
Other DBs
NCBI-ProteinID:
AUH67564
LinkDB
All DBs
Position
721047..723260
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AA seq
737 aa
AA seq
DB search
MAIEADLGREPDLPPEPPTEEFGRQPPQDQQAEQSVLGGMMLSKDAIADVLERIRPGDFY
KPAHQAVYDAILELYGRGEPADAVTVAAELERKGELRKVGGAPYLHTLISTVPTAANAGY
YAEIVGEKSILRRLVEAGTRIVQYGYAGADGQDVAEVVDRAQAEIYEVTERRTTEDYVPL
EELLQPTLDELDSIASRGGLSLGVPTGFADLDKLTNGLHPGQMIIVAARPGVGKALALDT
PLPTPSGWTTMGRVAKGDLLLGADGRPTTVVAATEVMTRRPCYAVEFDDGGVIVADEQHQ
WAVEVDGEDRLLTTEQLQIYGGRASIANAAPLELPYRPLAYGPYTVGALAGMAYDDPEIG
ARIEAEGPVDVMTLMTDLGGRIPHEYLRGSVPQRRALLAGILDSRARVDDDGWITVPAAT
NHMSSVVGDLAAGLGYTFRRASSGWIRLNAPDDVFTVFEKAQRHKELRSSVRARRVVSVR
SVPSVPVRCVEVDNMSHLYLAGEAMVPTHNSTLAMDWLRSASIHHGLTSAMFSLEMSKTE
IVMRLLSAEAKVKLGDMRSGNMSDDDWSRLARRMGEITEAPLFIDDSPNLTMMEIRAKAR
RLKQKHDLKLVVIDYMQLMTSGKKVESRQQEVSEFSRSIKLLAKELEVPVVAISQLNRGP
EQRTDKRPQVSDLRESGSLEQDADMVILLHRPDSTERDDPRAGEADIIVGKHRNGPTATI
TVAHQLHLSRFVDMARG
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
gtggctattgaggccgacctcgggcgcgagcccgatctcccgccagaacctccgacggag
gagttcggacgacagccaccgcaggatcagcaggccgagcagtcggttctgggcggcatg
atgctgtcgaaggacgcgatcgccgacgtgctcgaacggatccgtcccggcgacttctac
aagcccgctcaccaggccgtgtacgacgcgatcctcgagttgtacggccgcggcgaaccc
gccgacgccgtcaccgtcgccgccgagttggagcgcaagggcgaactgcgcaaggtcggc
ggcgcgccgtacctgcacacgctgatctcgacagtccccaccgcggcgaacgccggctac
tacgccgagatcgtcggcgagaagtcgattctgcgcaggctcgtggaggcgggtacccgc
atcgtgcagtacggctacgccggggccgacggccaggacgtggccgaggtggtcgaccga
gcgcaggcggagatctacgaggtcaccgagcgtcgcaccaccgaggattacgtgccgctg
gaggaactgctccagcccacgctcgacgagctcgattcgatcgcgtcgcggggcggactg
tcgttgggcgtgcccaccggtttcgccgacctcgacaagctgacgaacggtcttcatccc
ggtcagatgatcatcgtggcggcgcgtccgggcgtcggcaaggcgctggcgctcgacacg
ccgctgccgactccgagcgggtggaccacgatgggccgggtcgcgaagggtgacctgctc
ctgggggccgacggtcgtccgaccaccgtcgtcgccgcgacagaggtgatgacccgccgg
ccctgctatgcggtggagttcgacgacggcggtgtgatcgtcgccgatgaacagcatcag
tgggccgtggaggtcgacggcgaggaccggctgctgaccaccgaacagctccagatctac
ggcggccgcgccagcatcgccaacgctgcgccgctcgaactgccgtaccgcccgctggcc
tacggcccgtacaccgtcggcgcgctggccggaatggcgtatgacgacccggagatcggc
gcgcggatcgaggccgagggtccggtcgacgtcatgacgttgatgacggatctgggcggc
cgcatcccgcacgagtacctgcgcggttcggtgccgcagcggcgcgcgctgctggcgggc
atcctggactcccgcgcgcgtgtggacgacgacggctggatcaccgtgcccgcggccacc
aaccacatgtcttccgtggtcggggatctcgccgccggcctcggctacaccttccgccgg
gccagcagcggctggatccggctcaacgcgcccgacgacgtgttcaccgtcttcgagaag
gcccagcgacacaaggaactgcgcagcagcgtgcgggcgcggcgggtggtgtcggtgcgc
tcggtgccgagtgtcccggtgcggtgcgtcgaagtcgacaacatgagccacctgtacctg
gcgggtgaggcgatggtgccgactcacaactccaccctcgccatggactggctccgttcg
gcgtcgattcatcacgggctcacctcggccatgttctcgctggagatgagcaagacggag
attgtcatgcgactgctgtcggccgaggcgaaggtgaagctcggcgacatgcggtcgggc
aacatgagcgacgacgactggagccggctggcgcgccgcatgggcgagatcaccgaggcg
ccgctgttcatcgacgactcgccgaacctcaccatgatggagatccgggccaaggcccga
cggctgaagcagaagcacgatctcaagctcgtcgtcatcgactacatgcagctgatgacg
tcgggcaagaaggtcgaatcacgtcagcaagaggtctcggagttctcgcgatcgatcaag
ctgctcgccaaggagctcgaggtgccggtggtggcgatcagccagctgaaccgtggcccc
gaacagcggaccgacaagcgtccccaggtctccgacctgcgcgaatcgggatcgctggag
caggatgccgacatggtcatcctgctgcaccgtcccgactcgaccgaacgcgacgacccg
cgcgcgggtgaagcggacatcatcgtcggtaagcaccgcaacggtcccactgcgacgatc
acggtggcgcaccagttgcacctgtctcggttcgtcgacatggcgcggggctga
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