Gordonia sp. YC-JH1: CXX93_07405
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Entry
CXX93_07405 CDS
T05256
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
goc
Gordonia sp. YC-JH1
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
goc03016
]
CXX93_07405
Enzymes [BR:
goc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CXX93_07405
Transfer RNA biogenesis [BR:
goc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CXX93_07405
Prokaryotic type
CXX93_07405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AUH68213
LinkDB
All DBs
Position
1618172..1619059
Genome browser
AA seq
295 aa
AA seq
DB search
MTTQPVPIIDGDGLCRLRLLIGYDGTDFSGWATQPGRRTVCESLEQMLSTVLRAPIRLTV
AGRTDAGVHAAGQVAHCDVPVASLQTRSIDGDPSRLVRRLAKMLPDDVRVKRIETVSADF
DARFSALARTYEYRLTDAAWGAEPTLARTTADWTRPLDVEAMNAASAALVGLNDFAAFCR
YRPGSTTIRELQRFSWRRDGDVLVGTVVADAFCWSMVRSLVGAVASVGDGRRGVDWCAGL
LSERARSAQVPVAQARGLCLMSVSYPPPEEWAARNERTRDVRDAGDLGCAGPVVE
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacagcccgtccccatcatcgatggggacgggctgtgtcgtcttcggctgctg
atcggctacgacggcaccgacttctccggctgggccacgcagcccggtcgacggacggtc
tgcgagagtctcgagcagatgctgagcaccgtgctccgcgcgccgattcggctgactgtc
gcgggccggaccgacgccggtgtccacgccgccgggcaggtggcgcactgcgacgtcccc
gtcgcgtcgttgcagaccaggtccatcgacggggacccgtcgcgactggttcgcaggctc
gccaagatgctcccggacgatgtacgggtgaagcggatcgagaccgtttccgcagacttc
gatgcgcgtttctccgcactggcgcgcacgtacgaataccggctcaccgacgccgcgtgg
ggcgccgagccgaccctcgcccgcaccaccgccgattggacccggcccctggacgtcgag
gccatgaacgcggcctcggcggctttggtcgggctcaatgacttcgcggccttctgccgc
taccggccgggctccaccaccatccgcgaactccagcgcttcagttggcggcgagacggc
gacgtgctggtcggcaccgtggtggccgacgccttctgctggtcgatggtccggtccctc
gtgggcgcggtggcctcggtcggcgacggtcgccgcggcgtcgactggtgtgccgggctg
ttgtctgagcgcgcacgctccgcgcaggtgcccgtggcgcaggcccgtggcctgtgcctg
atgagcgtgagctacccgccgcccgaggagtgggcggcgcgcaacgaacggacgcgggac
gtccgcgacgccggtgatctcgggtgtgcgggtccggtcgtggagtag
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