Gordonia sp. YC-JH1: CXX93_13715
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Entry
CXX93_13715 CDS
T05256
Name
(GenBank) RNA polymerase subunit sigma
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
goc
Gordonia sp. YC-JH1
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
goc03021
]
CXX93_13715
Transcription machinery [BR:
goc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CXX93_13715
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GerE
Motif
Other DBs
NCBI-ProteinID:
AUH69198
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Position
2946006..2947004
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AA seq
332 aa
AA seq
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MAHSTIARPSEARSTRTRPALTEQDLDAQSPSADLVRVYLNGIGRTALLTAEQEVDLSKA
IEAGLYAKHLLATKKRLSPAKKRDYAILVREGEQARAHLLEANLRLVVSLAKRYTGRGMP
LLDLIQEGNLGLIRAVEKFDYAKGYKFSTYATWWIRQAISRGMADQSRTIRLPVHLVEQV
NKLARIRRELHQQLGREATDEELALESGIPAEKIADLMDHSRDPVSLDMPVGNDEEAPLG
DFIEDAEATSAETVVIANLLHSDIRSVLSTLDEREMQVITMRYGLEDGQPRTLDQIGRAF
GLSRERVRQIEREVMTKLRQGDRAEKLRAYAS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggctcactcgacgattgcccgcccgtccgaagctcgttccacccgtactcgcccggct
ctcaccgagcaggatctggatgcgcagtcaccctcggccgacctcgtccgcgtctacctc
aacggcatcggccgcaccgctctgctgaccgctgagcaggaggtcgacctgtccaaggcc
atcgaggccgggctgtatgcgaagcatctcctggccaccaagaagcgcctcagcccggca
aagaagcgcgattacgccattctcgtccgcgagggcgaacaggctcgcgcgcatctgctc
gaggcgaacctgcgcctggtggtctccctggccaagcgctacaccggccggggcatgccg
ctgctcgacctcatccaggagggcaacctcggtctgatccgcgccgtcgagaagttcgac
tacgcgaagggctacaagttctcgacctacgcgacctggtggatccgccaggcgatcagc
cgcggcatggctgatcagagccgcaccatccgcctgcccgtccacctcgtggagcaggtc
aacaagctggcccgtatccgccgcgaactgcaccagcagctcggccgggaggccaccgac
gaggaactggccctggaatcgggcatcccggctgagaagatcgccgatctgatggaccac
agccgcgatccggtgagcctggacatgcccgtcggcaacgacgaggaggcgccgctcggc
gacttcatcgaggacgccgaggccacctcggccgagaccgtcgtcatcgcgaacctcctg
cactccgacatccgctcggtgctctcgacgctcgacgagcgggaaatgcaggtcatcacg
atgcggtacggcctcgaagacggtcagccgcgcacgctcgaccagatcggccgcgccttc
gggctctcgcgcgagcgtgtccgccagatcgagcgcgaggtcatgaccaagctgcgtcag
ggcgaccgcgccgagaagctccgcgcttacgcgagctga
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