Gordonia insulae: D7316_00827
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Entry
D7316_00827 CDS
T05722
Symbol
ruvB_1
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
gom
Gordonia insulae
Pathway
gom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D7316_00827 (ruvB_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gom03400
]
D7316_00827 (ruvB_1)
Enzymes [BR:
gom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D7316_00827 (ruvB_1)
DNA repair and recombination proteins [BR:
gom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D7316_00827 (ruvB_1)
RecFOR pathway proteins
D7316_00827 (ruvB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
IstB_IS21
Zeta_toxin
nSTAND3
RNA_helicase
AAA_3
HTH_AsnC-type
AAA_14
AAA_33
Resolvase
TsaE
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
AZG44243
UniProt:
A0A3G8JGW2
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All DBs
Position
853857..854948
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AA seq
363 aa
AA seq
DB search
MTRDEMPDPDERPVSPTEQPTDGDFDAGLRPRSLADFIGQPRVCEQLELVLQGAKGRGGT
PDHILMSGPPGLGKTSLAMIIAAEMGAAIRVTSGPALERAGDLAAMLSNLVDGDVLFIDE
IHRIARPAEEMLYLAMEDFRVDVVVGKGPGATSIPLDVAPFTLVGATTRSGSLTGPLRDR
FGFTAHMEFYETDELVRVLRRSAGILGIRLLPDASTEIARRSRGTPRIANRLLRRVRDYA
EVRSDGVVTVEVARAALAVYDVDDLGFDRLDRAVLNALVRGFGGGPVGVSTLAVAVGEEP
TTVEEVCEPFLVRAGMMARTPRGRVATAAAWHHLGLTPPAGAMNASFGVRSRDAITESLF
DDL
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgacgagatgcccgatcccgacgaacgtccggtgagtccgaccgaacagccc
acggacggcgacttcgacgcgggcctgcggccacgctcgctggccgacttcatcggccag
ccccgggtgtgcgagcagctcgaactcgtcctgcagggggcgaaggggcgcggtggcact
cccgaccacatcctgatgtcgggtccgcccggactgggcaagacgtctctggcgatgatc
atcgccgccgagatgggagccgcgatccgcgtcacctcggggccggcgctggaacgagcg
ggtgacctcgccgcgatgctgtccaacctggtcgacggcgacgtgctgttcatcgacgag
atccaccgcatcgcccggcccgccgaggagatgctctacctcgccatggaggacttccgt
gtcgatgtcgtcgtggggaagggcccgggcgcgacgtccatcccactcgacgtcgcgccg
ttcaccctggtcggtgccaccacgcgatccggttcgctgaccggcccgttgcgtgaccgc
ttcggcttcaccgcgcacatggagttctacgagaccgacgagctggtccgggtcctgcgt
cgatccgcgggcatcctcggcatccgactgctgccggatgcgtccaccgagatcgcgcgt
cgctcgcgggggacgccgcggatcgccaaccggcttttgcgccgcgtgcgcgactacgcg
gaggtccgcagcgacggcgtggtcaccgtcgaggtcgcgcgtgccgcgctcgcggtgtac
gacgtcgacgacctgggtttcgaccgactcgatcgcgcggtgctcaacgcgctggtccgc
gggttcggtggcggtccggtaggggtgtccaccctggctgtcgccgtgggggaggagccg
accaccgtcgaggaggtctgtgagcccttcctggtgcgggccgggatgatggcgcgcacg
ccgcgcggccgcgtcgcgacggccgcggcctggcaccatctcggactgacgccgcccgcc
ggcgcgatgaacgccagtttcggggtgcgatcccgggacgcgatcacggagagcctgttc
gacgatctatag
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