Gordonia insulae: D7316_02731
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Entry
D7316_02731 CDS
T05722
Symbol
ramB
Name
(GenBank) HTH-type transcriptional regulator RamB
KO
K07110
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
gom
Gordonia insulae
Brite
KEGG Orthology (KO) [BR:
gom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gom03000
]
D7316_02731 (ramB)
Transcription factors [BR:
gom03000
]
Prokaryotic type
Helix-turn-helix
XRE family
D7316_02731 (ramB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ScfRs
Peptidase_M78
HTH_3
HTH_31
HTH_19
HTH_25
HTH_26
HTH_24
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AZG46130
UniProt:
A0A3G8JPP4
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All DBs
Position
2943341..2944759
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AA seq
472 aa
AA seq
DB search
MTKTYVGSRLRQLRSERGLSQVALAQSLSISPSYLNQIEHDARPLTVPVLSKITEVFGID
EEFFDSQDSVRLVAELREVLLDDDVEAAPAAVDAHEISSVVAAHPEIAQAMVNLHQRYRI
VTDQLAAATDERGDRSMRGSITAPHEEVRDYFYQRRNYIHELDMAAEGMTVRMRMHSADI
RREIGNRLENKHGVSIVRRVDLGDYTLHRFDPVTRRLEFSAALSAGQRTMKLAAELGYLE
YGDLLEKLVEDGNFTSDEARSLAQLGLANYFAAAVVLPYSQFHGAAEDFRYDIERLSAFY
AVSYETICHRLSTLQRPNLRGIPWSFVRVDRAGNMSKRQSATGFHFSSSGGTCPLWNVYE
TFASPGKILTQIAEMPDGRDYFWVARTVERRAARYGQPGKTFAIGLGCELRHAGRVIYSD
GLEIGPQAQITPIGAGCRVCERQNCAQRAFPALGATLQIDEHRSTVSPYMTS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagacctacgtcggttcccggctgcgtcagctgcggtcggaacgaggcctgtcg
caggtcgccctggcccagtcgctgtccatctcgccctcctatctgaaccagatcgagcac
gacgcgcgaccgctgaccgtacccgtgctgtcgaagatcaccgaggtcttcggcatcgac
gaggagttcttcgactcgcaggacagtgtccgactggtcgccgagttgcgtgaggtcctc
ctcgacgacgacgtggaggcggcgcccgcggcggtcgacgcgcacgagatcagctcggtc
gtcgccgcccacccggagatcgcccaggcgatggtcaacctgcaccagcgctaccggatc
gtcaccgaccaactcgcggcggccaccgacgaacgcggggaccgcagcatgcggggttcc
atcaccgcaccgcacgaggaggtgcgcgactacttctatcagcgccgcaactacatccac
gaactcgacatggcggccgaggggatgacggtccggatgcgcatgcactccgccgacatc
cggcgcgagatcggcaaccggttggagaacaagcacggtgtgagcatcgtgcgccgggtc
gacctcggcgactacacgctgcaccggttcgatccggtcacccgccggctggagttctcc
gctgcactgtccgcggggcagcgcaccatgaagctcgccgccgagctcggctacctcgag
tacggcgatctgctcgagaaactggtcgaggacggcaacttcaccagtgacgaggcacgc
tcactcgcacagctcggcctggccaactacttcgccgccgcggtcgtgttgccctacagc
caattccatggcgcagctgaggatttccgatacgacatcgaacggctgtcggcgttctac
gccgtctcctacgagacgatctgccaccgcctctccacgctgcagcgcccgaacctccgc
ggcatcccgtggtcgttcgtgcgtgtcgatcgggcgggaaacatgtcgaaacggcagtcc
gccaccggcttccacttctcgtcgagcggcggcacgtgcccgctgtggaacgtctacgag
acattcgcctcgcccggcaagatcctcacccagatcgccgagatgccggatggccgcgac
tacttctgggtggcgcgcacggtcgaacgtcgtgccgcccgctacgggcagccgggcaag
accttcgcgatcggcctcggctgcgaactgcgacatgcgggccgggtcatctactccgac
ggactcgagatcggcccacaggcacagatcacgccgatcggcgcgggttgtcgcgtctgc
gagcggcagaactgcgcgcaacgggcgttccccgcgctcggcgccaccttgcagatcgac
gaacaccgcagcacggtgtccccgtatatgaccagctga
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