Gordonia sp. KTR9: KTR9_2140 Help Entry KTR9_2140         CDS       T02216                                  Name (GenBank) HrpA-like helicase   KO K03578   ATP-dependent helicase HrpA [EC:5.6.2.6] Organism gor  Gordonia sp. KTR9 Brite KEGG Orthology (KO) [BR:gor00001]  09190 Not Included in Pathway or Brite   09191 Unclassified: metabolism    99980 Enzymes with EC numbers     KTR9_2140 Enzymes [BR:gor01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      KTR9_2140 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF3418 OB_NTP_bind HA2_C Helicase_C DEAD AAA_22 AAA_19 nSTAND3 HA2_N NACHT ABC_tran T2SSE AAA_23 SLFN-g3_helicase FtsK_SpoIIIE TsaE AAA_16 Motif Other DBs NCBI-ProteinID:  AFR48777 UniProt:  J9RK41 LinkDB All DBs Position complement(2427601..2431590) Genome browser AA seq 1329 aa AA seqDB search MSAPSSSPSPSSGSASSTDASSVSRTDLLGALDDVGLVDADRLRRRIDRLSARPDAPKWQ QLVTDVDKARARLDRRRASVPVLRFPDELPVSAARDEIAAAIRDHQVVVIAGETGSGKTT QLPKICLELGRGIRGSIGHTQPRRIAASSVARRIADETETELGDAVGYSVRFTDRSGADT LVRVMTDGILLREIATDPMLRRYDTLIIDEAHERSLNIDFILGYLRRLLPRRPDLKVIIT SATIEPARFARHFSTPSASVPVIEVSGRTYPVEIRYRPLSLQERPDDGDDAGGGEHADLD QIQGIDAAVDELWAGGRGDILVFLPTERDIRETADALRRRTVGGKGPAAEIVPLYARLSI AEQQKVFAPSDGRRIVLATNVAETSVTVPGIRYVIDTGTARISRYSTRTKVNRLPIEPVS QASARQRAGRCGRVAPGVCIRLYSENDFESRPAFTDPEILRTNLAAVILQMTSLKLGEIA EFPFVQPPDDRAIRDGMGVLTELGAITVPSEGGPPRLTPIGRSMSRIPVDPRVARMLIAG HELGCLDHLLVIAAAMSLPDPRERPAEHREAADAQHRRFVVPQSDFLSYVELWRYLGEQR KAMSSSGFRRMCEREYLHFLRIREWQDLHRQLTEIVKDLDWSVAATELDADAVHRAILSG LLSNIAARNTEGREFTGARNTTLLIFPASSLAKKPPAFIMAAEVLETSRLFAHTVAGIDP LWAERLAGDLVKRTHSEPHWSARRGAAMAYERVTLYGVPLVARRRVDYGPIDPEVSRELF IRHALVEGDWRTQHGFFERNRNLLDAATDVENRTRTRGLVITEDQLFEFYDRRLPPDITS ARHFDTWWKKARRAEPDLLDLRPEDVTGGTEVAPTDYPGAWQQGDTRLELRYRFEPGAPD DGVTVVIPQALLPHIRPVGFDWSVPGMRTELATALVKTLPKQLRKSMSPAQRFAEAALGR LTPRKEPLTAGLARELSAITGMTVTAADFDTDRVPAHLRMHFAVADGSGQIIARADSLSE LQQTRTPAAPRTVSRTLYRNWTADGIGTLADQKTVDVAGQRLTRYPTIDAVSDEKGRTRG VIAVDAATPETRDRLLRRGIVALLDLAIPPLHKRIAGSLGPAARLALSQSPYADTEALLA DCTRRAIRDTVAGVDDAELTALRSPQAFSEFLERIRPRITEAAPDYFSLAVAALERMAPV RAAIDRHAGSLAADDVAEQIDHLVFDGFVAATARRHLENLPRYLEGAQARLEALPGSAAR DQAGVAVIDRVVERWAQRLEQVPEHRRAIVDDEAQWLVEELRVGLFAQRLGTAFPVSEKR VLRALDRLG NT seq 3990 nt NT seq  +upstreamnt  +downstreamnt atgtcggccccgtcttcctccccctccccgtcctcgggaagtgcctcgtccacagatgca tcgagcgtctcgcgcacggacctcctcggcgcactcgacgacgtgggcctcgtcgacgcc gaccggctgcggcgtcgcatcgaccggctctcggcgcgtcccgatgccccgaagtggcag cagctcgtcaccgacgtcgacaaagcacgtgcccgtctcgaccggcggcgggcgagcgtg ccggtccttcgattccccgacgagctccccgtctcggcggcccgggacgagatcgccgcg gcgatccgtgaccaccaggtcgtggtcatcgcgggcgagaccggctcgggcaagaccacc cagctgccgaagatctgcctcgaactcggccgcggcatccgtgggtcgatcggccacacc cagccccgccggatcgcggcgagctcggtcgccagacgcatagccgacgagaccgagacc gaactcggcgacgcggtcggctactccgtacggttcaccgaccggtccggtgccgacacc ctcgtccgggtcatgaccgacggcatcctgctgcgcgagatcgccacggacccgatgctg cgccgctacgacaccctcatcatcgacgaggcgcacgagcgcagcctcaacatcgacttc atcctcggatacctgcgccggctgctgccccggcgtccggatctcaaggtgatcatcacc tcggcgacgatcgagccggcccggttcgcacggcatttcagcacgccctcggcgtcggtc ccggtcatcgaggtctcgggccgcacctatccggtcgagatccgctaccgtccgctgagc ctgcaggagcggcccgacgacggtgacgacgccggcggtggcgaacacgccgacctcgac cagatccagggcatcgacgccgccgtcgacgaactgtgggcgggtggccgcggcgacatc ctcgtgttcctgcccaccgaacgggacatccgggagaccgcggacgcgctgcgtcgccgc accgtcggcggcaaggggccggctgccgagatcgtgccgctgtacgcgcggttgtcgatc gccgagcagcagaaggtgttcgccccctccgacgggcgccggatcgtgctggcgaccaac gtggccgagacctcggtcaccgtgcccggcatccggtatgtcatcgacaccggcaccgcc cggatcagtcgatactcgacccggacgaaggtcaatcgccttcccatcgaaccggtgtcg caggccagcgcccggcagcgcgccggtcgttgcggtcgcgtcgcgccgggtgtgtgcatc cgcctctacagcgagaacgacttcgagtcccggcctgcgttcaccgacccggagatcctg cgcaccaatctcgccgccgtcatcctgcagatgacctccctcaagctcggtgagatcgcc gagttcccgttcgtccaaccgcccgacgaccgggcgatccgcgacgggatgggtgttctc accgaactcggcgccatcaccgtcccgagtgagggcggccccccgcggctgaccccgatc ggccggtcgatgtcgcggattccggtcgatccccgggtcgcccggatgctcatcgccggg cacgagctcggctgcctcgatcaccttctcgtcatcgccgccgcgatgtccctccccgac ccccgggaacggcctgccgaacaccgcgaggccgccgacgcccagcaccggcgcttcgtc gtgccccagtcggacttcctgtcgtacgtggagctgtggcgatacctcggcgaacagcgt aaagcgatgtccagcagcggtttccgtcggatgtgcgagcgtgagtacctgcacttcctg cgcatccgggaatggcaggacctccatcgacagctgaccgagatcgtcaaggacctcgac tggtcggtcgcggcgaccgagctcgacgccgacgccgtccaccgggccatcctgtccggg ttgttgagcaacatcgccgcccgcaacaccgagggccgcgagttcaccggcgcgcgcaac acgacactgctcatcttccccgcctcgtcccttgcgaagaagccgccggccttcatcatg gccgccgaggtcctggagacgtcgcggctcttcgcgcacaccgtcgccgggatcgatccc ctgtgggccgagcgcctcgccggcgacctggtcaaacgcacccacagcgagccgcactgg tccgcccgacgcggcgcggccatggcctacgagcgcgtcaccctctacggggtccccctc gtcgcccgtcggcgcgtcgactacggccccatcgacccggaggtctcgcgcgagctgttc atccggcacgccctggtcgagggtgactggcggacgcaacacgggttcttcgagcgcaac cgcaatctcctcgacgccgccaccgatgtcgagaaccgcacgcgcacccgcggtctcgtg atcaccgaggatcagctcttcgagttctacgaccggcgcctaccgcccgacatcacctcc gcacgtcacttcgacacctggtggaagaaggcccggcgggccgagcccgatctgctcgac ctgcgtcccgaagacgtcacgggtggcaccgaggtggctccgacggactaccccggcgca tggcagcagggcgacacacggctcgaactgcggtaccggttcgagcccggcgcacccgac gacggggtcacggtcgtcatcccacaggcactgctcccccacatccgcccggtcggcttc gactggtcggtccccgggatgcgtaccgaactggccaccgcgctggtcaagaccctgccg aaacagctgcgcaagagcatgtcccccgcccaacggttcgccgaggcggccctcggccgg ctcaccccacgcaaggaaccgctgaccgcggggctcgctcgcgaactctccgcgatcacc gggatgacggtcaccgcagccgatttcgacaccgaccgggtaccggcacaccttcggatg catttcgcggtcgccgacggatccggacagatcatcgcccgggccgactcgttgtccgag ctccagcagacccggacgccggcggcaccgagaacggtgtcacgcacgctgtaccggaac tggaccgccgacgggatcggcacgctcgccgaccagaagacggtcgacgtcgccggacaa cggctgaccaggtacccgacgatcgacgcggtgtccgacgagaagggacgcacgcgaggc gtcatcgccgtcgacgcggcgactcccgagacccgcgaccggctgctgcgtcgcggcatc gtcgccctcctcgatctggcgataccaccgctgcacaagcgaatcgcgggatccctgggc ccggcggcgcgactcgccctgagccagagcccgtatgcggacaccgaggcgctgctcgcc gactgcacacgacgggccatccgggataccgtcgccggcgtcgacgacgccgagctgacg gctcttcgctcgccacaagcattttcggaattcctggagcgtatccggccacggatcacg gaggccgcgccggactacttctcgctcgccgtcgcggcgctcgaacgaatggcgccggtc cgggcggcgatcgaccggcacgccggttcgctggccgccgacgacgtcgccgagcagatc gaccacctcgtgttcgacggattcgtcgcagccaccgcccgacggcacctggagaacctg ccgcgctacctcgaaggtgcgcaggcacgtctggaggcgctgcccgggtcggcagcgcgc gaccaggccggtgtggcggtcatcgatcgagtcgtcgaacggtgggcccaacgactcgaa caggtgccggaacaccgacgggcgatcgtcgacgacgaagcgcagtggcttgtcgaggaa ctacgggtgggattgttcgcccagcgtctcggtaccgcgtttcccgtctcggagaaacgg gtcctacgagctctggaccggctcggctga

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