Gluconobacter oxydans DSM 3504: GLS_c16440
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Entry
GLS_c16440 CDS
T03563
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
goy
Gluconobacter oxydans DSM 3504
Pathway
goy03410
Base excision repair
goy03430
Mismatch repair
goy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
goy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GLS_c16440 (recJ)
03430 Mismatch repair
GLS_c16440 (recJ)
03440 Homologous recombination
GLS_c16440 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goy03400
]
GLS_c16440 (recJ)
DNA repair and recombination proteins [BR:
goy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GLS_c16440 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GLS_c16440 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GLS_c16440 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AHK71522
UniProt:
A0A067Z5Y8
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All DBs
Position
complement(1891967..1893766)
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AA seq
599 aa
AA seq
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MLADDTGAVLGVTRSAGHRRWIWRDPRLAEADNRLALALAQQAGIPELLARILSARGVAP
HDASSFLNPRLRDAMPDPSCLQDMDRAAERLAQAVRNREHVGLFGDYDVDGACGTALVCD
TLRELGCTVSTHIPDRLTEGYGPNTEALENLLSEGATLLVCIDCGTAAIDILNGLTDRAD
IIVLDHHKPDGAALPKGIVVNPNRLDCTSGLGSICATAVAFLTMVATIRHLRRTNWFDEG
QVIPDLLKRLDLTALATICDVMPLTGLNRALVMQGLRVMSRGERLGLATLSSVAGVKEEA
SAMACGFALGPRINAGGRIAQADLGLKLLLSDDVVEARALAEQLDRVNRQRQTVESTILD
SAMEQAQQQLDAGHAVIFLHGETWHPGVVGIVAGRLKERYNRPALVAALTDGVIKGSGRS
VPGLDLGTAIIAARQNGLLLTGGGHAMAAGFSLSADRTDEFHSWLDTQLSSALTLPKQDA
LKLDGIMTLAGASIAVADQLARLEPFGPGNEEPVLAISNIRCVKSERIGKDGNTLRVILQ
GEDGGTRLRGLVFRAADKPFAALLEDRSMPLVHVAGTLRAETWQERKNLSFFISDAAPA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcagacgatacgggtgccgtcctcggcgtaacccgaagtgcaggacaccgccgc
tggatctggcgcgatccccgcctggcggaagcagacaatcgcctggcactcgccctggcc
cagcaggccggtattcccgaacttctggcccgtatcctctcggcacgaggcgtcgctccc
cacgacgcctcttcgtttctcaatccccgtctgcgcgatgccatgcccgacccgtcctgc
ctgcaggacatggaccgggccgccgaacgcctcgcacaggccgtgcgcaaccgcgagcat
gttggcctgttcggcgactacgacgtggacggcgcctgcggaactgccctcgtctgcgac
acgctgcgcgaactcggctgcaccgtcagcacccacattcccgaccgcctgaccgaaggc
tacggccccaacaccgaagcccttgaaaacctgctctccgaaggcgccacgcttctggtc
tgtatcgactgcggcacagcagcgatcgacatcctcaacggcctgaccgaccgtgccgat
atcatcgtcctcgaccaccacaaacccgacggggcagccttaccgaaaggcattgtggtc
aacccgaaccgtctggactgcacctccgggctgggaagcatctgcgccacggcggtcgcc
ttcctcaccatggtcgccacgatccgccatctgcgccgcaccaactggttcgatgaaggt
caggtcattcccgacctgctcaaacgcctcgacctcacggcgctggcgaccatctgcgac
gtcatgcctctgaccggcctgaaccgcgctctggtcatgcagggcctgcgcgtcatgtcc
cgtggcgagcgcctcggactggccacgctgtcctccgtcgcaggcgtgaaagaagaagcc
agcgccatggcctgcggctttgccctcggtccccgcattaatgctggtggccgcatcgca
caggccgatctgggcctgaaactcctgctgtcggacgatgtcgtggaagcccgcgccctc
gccgaacagctcgaccgcgtcaaccgccagcgccagaccgtcgaatccacaatcctcgat
tccgccatggaacaggcacagcagcagctcgatgcgggccacgccgtcatcttcctgcat
ggtgaaacatggcaccccggcgtcgttggcatcgtcgcaggccgcctgaaagagcgctac
aaccgccccgccctcgtcgcggccctgacggatggcgtcatcaagggctcgggccgctcc
gtccccggactggatctcggaaccgccatcatcgccgcccgtcagaacggcctgctcctc
accggcggcggccacgccatggcagccggcttttcgctttctgccgatcgcacggatgag
ttccacagctggctcgacacacagctttccagcgccctcacccttcccaaacaggacgcc
ctgaagctcgacggcatcatgaccctggccggcgcctccatcgctgtcgccgaccagctt
gcccggctggaacccttcggccccggtaacgaagaaccggtcctcgccatcagcaatatc
cgctgcgtcaaaagcgagcgtatcggcaaggacggcaacaccctgcgcgtcatcctgcaa
ggcgaggacggaggcacacgcctgcgcggcctggtcttccgtgcagccgacaaacccttc
gccgccctgctggaagaccgctccatgccactggtccatgtcgcaggcacattgcgggcc
gagacatggcaggagagaaaaaatctgtcttttttcatttctgacgctgcccccgcttga
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