Gordonia pseudamarae: GII33_01300
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Entry
GII33_01300 CDS
T07482
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
gpd
Gordonia pseudamarae
Pathway
gpd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GII33_01300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpd03400
]
GII33_01300
DNA repair and recombination proteins [BR:
gpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
GII33_01300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF5783
Motif
Other DBs
NCBI-ProteinID:
QHN24807
LinkDB
All DBs
Position
320119..320931
Genome browser
AA seq
270 aa
AA seq
DB search
MRSIWKGDLSFGLVNVPVKVYSATESHDRTSHQVDSADGTRIRYRRVREGTDTEVDYAKI
ANAYEADSGETVIVTKDDLATLPVNRSPEISILEFVPREQVDPIYFDKPYYLEPASKSPK
AYTLLARALEQTDRLAVAEFTLRNRTRLAVVRIIDGVMTLQTLLWPDEVRPPEFTFLDTE
VELRPQELEMAASLIESMATDFDPSRFEDKYQIELSKLIEARSEGGEAFPETEEPGSDDD
SEVADLLAALRASVKNRASGQEPKTGRQAS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcgatctggaagggcgatctcagctttggcctggtgaatgttccggtcaaggtg
tactcggccacggaaagccacgatcgcacatcgcatcaggtcgactccgccgacggcaca
cgcatccggtaccgccgcgtccgcgagggcaccgacaccgaggtcgactacgcgaaaatc
gccaacgcctacgaggccgactccggcgagacggtgatcgtcaccaaggatgatctggcg
acgctgccggtgaatcgttcaccggagatatccatcctggagttcgtcccgcgcgaacag
gtcgaccccatctacttcgacaaaccgtactacctcgaaccggcgtcgaaatcgccgaag
gcgtacacgctgctggcacgggcgctcgaacagaccgaccgcctggccgtcgccgagttc
accctgcgcaatcgcacccggctggcggtggtgcggatcatcgacggcgtgatgacgcta
cagaccctgctctggcccgacgaggtgcgtccacccgaattcacgtttctcgacaccgag
gtggaattgcggccgcaggaattggagatggcggcctctctcatcgagtcgatggccacc
gacttcgacccgagccggttcgaggacaagtaccagatcgaactgagcaaactcatcgag
gcgagatccgaaggtggcgaggcgttcccggagaccgaagagccggggtccgacgatgat
tcggaggtcgccgatctgcttgccgcgctgcgtgcctcggtgaagaaccgggcctcgggg
caggagccgaagacggggcgccaggcgagctga
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