Gemmatimonas phototrophica: GEMMAAP_03955
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Entry
GEMMAAP_03955 CDS
T04580
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
gph
Gemmatimonas phototrophica
Pathway
gph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GEMMAAP_03955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gph03400
]
GEMMAAP_03955
Enzymes [BR:
gph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
GEMMAAP_03955
DNA repair and recombination proteins [BR:
gph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GEMMAAP_03955
RecFOR pathway proteins
GEMMAAP_03955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Tex_YqgF
DUF460
Motif
Other DBs
NCBI-ProteinID:
AMW04220
UniProt:
A0A143BID2
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All DBs
Position
complement(971069..971608)
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AA seq
179 aa
AA seq
DB search
MKLVLGIDPGTAVTGFGVVALEGRAPTLVECGVIRTNARDPLAQRLHEVHAGVSELIARH
RPDTIAIEDVFYAKNVRTTVVLGHARGVILLAGQQARLTIHEYPPAEIKKAITGRGAATK
EQVQFMVTRLLRLKSAPQPADAADGVAAALCACMTATLPKLPELKLSTLLAKAAQEKRK
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactcgtgctcgggattgacccgggcacagcggttaccggctttggcgtggttgcc
ctggagggacgtgcccccacactcgtggagtgtggggtgattcgcaccaatgcccgcgat
ccgctggcgcagcgcctgcacgaggtgcacgcgggcgtgagcgagctgattgcccgccac
cgtcccgataccattgcgatcgaggatgtgttctacgccaagaacgtgcgcaccacggtg
gtgcttgggcatgcccgaggtgtcattctcctggcgggtcagcaggccaggctcaccatt
cacgagtacccgccggcggaaatcaagaaagcgattaccggccggggggcggccaccaag
gaacaggtgcagttcatggtcacgcggttgctgcgcctcaagagtgcaccgcagcccgcc
gatgccgcggacggggtggcggccgcgctctgcgcctgcatgacagccacccttcccaaa
ctgcccgaactgaagctcagcacgctgctcgccaaggcagcacaggagaagcgcaaatga
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