Geomonas paludis: M1B72_06180
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Entry
M1B72_06180 CDS
T08160
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
gpl
Geomonas paludis
Pathway
gpl00250
Alanine, aspartate and glutamate metabolism
gpl00310
Lysine degradation
gpl00350
Tyrosine metabolism
gpl00650
Butanoate metabolism
gpl00760
Nicotinate and nicotinamide metabolism
gpl01100
Metabolic pathways
gpl01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
M1B72_06180 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
M1B72_06180 (gabD)
00310 Lysine degradation
M1B72_06180 (gabD)
00350 Tyrosine metabolism
M1B72_06180 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
M1B72_06180 (gabD)
Enzymes [BR:
gpl01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
M1B72_06180 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
M1B72_06180 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
M1B72_06180 (gabD)
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Motif
Pfam:
Aldedh
DUF1487
ASCH
Motif
Other DBs
NCBI-ProteinID:
UPU37290
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Position
1438126..1439580
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AA seq
484 aa
AA seq
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MLMLKDKSLFHQLCFINGAWTGADSGETVEVLNPATGEKLGTVPKMGGAETRRAIEAAHA
ALPSWRAKTAQERSVIIRRWADLLLQHQDDLAVLMTAEQGKPLAEARGETVYAASFLEWF
AEEGKRVYGDVIPSDQAGKRIVVLKEPVGVCAAITPWNFPSAMITRKVGPALAAGCTIVV
KPATATPYSALALAVLAQRAGLPDGVFSVVTGSAAAIGGEMTANPLVRKLTFTGSTEVGK
KLMAQCAGTVKKVSLELGGNAPFIVFDDADLDAAVEGALISKYRNTGQTCVCTNRFLVQE
EIYDRFADKLAQAVAQLKVGDGLKGETQQGPLIDMAAVEKVEEHIGDALAKGARVVSGGN
RHALGGCFFEPTVLADVTPEMHIAREETFGPVAPLFRFRTEEEAIRLANDTEFGLCAYFY
SRGVTRVWRVAAAIEAGIVGINTGLISTVVAPFGGIKESGIGREGSRYGIEEFLEMKYLC
LGGM
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgctcatgctcaaggacaaaagtctattccaccagctttgcttcatcaacggcgcctgg
accggggccgacagcggcgagaccgtcgaagtcctcaaccccgccaccggggaaaaactg
ggcactgttcccaagatggggggcgccgagacgcgccgcgccatcgaggcggcccatgcc
gcgctgccgtcgtggcgcgcgaagaccgcccaggagaggtcagtcatcatcaggcgctgg
gccgacctgctgcttcagcatcaggacgacctggccgtgctgatgacggcggaacagggg
aaacccctggcggaggcccgcggcgagacggtctacgccgcctccttcctggaatggttt
gccgaggaggggaaaagggtctacggggacgtgattccctcggatcaggccggcaagcgg
atcgtggtcctcaaggagccggtcggcgtctgcgccgccatcaccccctggaacttcccc
tccgccatgatcaccaggaaagtggggccggcactggcggcgggatgcaccatcgtggtg
aaacctgccaccgcgacgccgtactccgccctggccctggcggtgctggcgcagcgcgcc
ggcctccccgacggcgtcttttccgtggttaccggctccgcggcggcaatcgggggggag
atgaccgccaacccgctggtgcgcaagcttacctttaccgggtctaccgaggtcggcaag
aagctgatggcccagtgcgcagggacggtcaagaaggtctccctcgaactgggcggcaac
gcccccttcatcgtcttcgacgacgccgatctcgatgcggcggttgaaggggcgctgatc
tccaagtaccgcaacaccggccagacctgcgtctgcaccaaccgcttcctggtgcaggaa
gagatctacgaccgcttcgccgacaagctggcgcaggcggtcgcccaactgaaggtgggg
gacgggctgaagggtgagacccagcaggggccgctgatcgacatggcggcggtggagaag
gtcgaggagcacatcggcgatgccctggccaagggagcccgggtcgtctccggtggcaac
cgccatgccctgggagggtgcttcttcgagcccaccgtcctcgccgacgtgaccccggag
atgcacattgcccgggaggagaccttcgggccggtggcgccgctgttccgcttcaggacc
gaggaggaagcgatacgtttggccaacgacaccgagttcggcctgtgcgcctatttttac
agccgtggcgtcacgcgggtctggcgggttgccgcagcgatcgaggccggcatcgtcggc
atcaacaccggactcatctccaccgtggtggcgcccttcggcggcatcaaggaatccggc
attggccgggaaggttccaggtatggcatcgaggagttcctcgagatgaagtatctctgc
ctcggcggcatgtga
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