Geomonas paludis: M1B72_09205
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Entry
M1B72_09205 CDS
T08160
Name
(GenBank) type IV secretion system DNA-binding domain-containing protein
Organism
gpl
Geomonas paludis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwB_AAD_bind
TraG-D_C
T4SS-DNA_transf
DUF87
DEAD
T2SSE
FtsK_SpoIIIE
AAA_29
cobW
HerA_C
ResIII
AAA_19
Zeta_toxin
AAA_16
AAA_22
SLFN-g3_helicase
nSTAND3
AAA_7
AAA_25
AAA_23
Motif
Other DBs
NCBI-ProteinID:
UPU37867
LinkDB
All DBs
Position
2149842..2151863
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AA seq
673 aa
AA seq
DB search
MDKNSYQGYEVQKHRLMMTVKMFFQISAFCLALQTLFFLLAFKVPRWSIDRTAATPGRPG
AWIIRNAERVPGVYREFLWKYPVAHLVQSVRLNPTFHIYAPGRLVKWPHDADGYVSMRAQ
EILRNVDYRQVLKAYRFPFFCSFLGWICVWPAALWYVRRTTTRIKEQEHIRGARLVTEEA
ISSETDASAILPIASILIPEALSRRHILIAGQTGSGKSTVLIQHIAAIQKAKRRAIVNDF
KGELVERFYRPEKDLILNPIDARGVGWTLFNELKSKPDLTAITGSLIPPAKGEDRFWSAA
AQDVLRGVMAYCYENNKRTNVELWKALTSPLNQITEMCRGTESGHAGYTYIQDASSKQAA
GVIAVLMSYVSWLEFAFDGPFSLRQWAEEGGDKMIFITNTDEVSNIMRPYLSLFADLAGK
RFLTLPDTSESMRNIYLILDELGNMQRLPSVKRLLTAGRSKGIVVEIGIPDFTSIESVYG
REDAHTIINSCGSKLVLNLGDPEAARFFSDLASEEECWESSTDYSISEHDHRGGENHNRQ
VRTRKVIMPAEIMRLPVGTGYFMLPGGNPAKVHIPLTDANKCPVVHRPFLLRPGLSLDEL
EAKNCEISVMAQNALAGPPLEELKIPAIKETAKDAYPPLKLVKGNLTPDATPVRPENVLH
RNEAEPDFPEDTP
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaacagctaccaaggatacgaggtccagaagcaccgcctcatgatgaccgtg
aagatgtttttccagatttccgctttttgcctggccctgcagaccctctttttcctgctg
gctttcaaggtcccgcggtggtcgattgatcggacggcggcaacgccaggccgcccagga
gcatggataatcaggaacgcggagcgggtgccaggggtgtaccgggagtttttgtggaaa
taccctgtagcccacttggtgcagtcggtccggcttaatcccacctttcacatctatgcc
cccgggcggctggtgaagtggccgcacgacgcagatggttatgtcagcatgagagcgcaa
gagatcttgcggaacgtcgattaccggcaggtactgaaggcctatcgcttccccttcttc
tgctcatttctggggtggatctgcgtatggccggcagccctttggtacgtgcggcgcacg
accacgaggataaaggaacaggagcatatccggggggcgcgacttgtgaccgaggaggct
atttcctcagaaacggacgcctcggccattctcccgattgcctcgatcctcatccctgaa
gcgctttccagacggcacatcctcatagccgggcagaccggttccggcaaatccaccgtg
ttgatccagcacatcgctgcgatccaaaaggccaagcgccgcgccatcgtcaacgacttc
aaaggagagttggtggaacgcttttaccggcctgaaaaagatctgattttgaaccccatc
gacgcccgcggggtggggtggaccctgttcaatgaattgaagtcgaagcctgaccttacc
gccataacggggtcgctgatcccccctgccaaaggggaggatcgtttctggagcgctgcg
gcacaggatgtcctgcgcggtgttatggcctactgttacgaaaacaacaagcgcaccaac
gttgagctttggaaggcgctcacctctccgctgaaccaaatcacagagatgtgccggggc
accgagtctggacacgctggctacacctacattcaggacgcaagtagcaagcaggccgcc
ggggtcatcgccgtcctgatgtcctatgtctcctggctcgagttcgcctttgacggcccc
ttctccttgcggcagtgggccgaggagggcggggacaagatgatcttcatcaccaacacg
gacgaggtgtccaacatcatgcggccgtacctttccctcttcgccgatcttgccggaaaa
aggtttctgacactgcctgatacctccgagtcgatgaggaacatctatctaattctggac
gagttgggcaacatgcagcgcctgccaagcgtgaagcggcttttgacggcggggcgttcg
aaagggatcgtcgttgaaataggcatccccgatttcaccagcattgagagcgtgtacggc
cgtgaggatgcacacaccatcatcaactcctgcggctcaaagctggtcctcaacctcggg
gacccggaggcggcacggttcttcagcgacctggccagcgaggaggagtgctgggagtca
tccaccgactattccatctccgagcatgatcacaggggtggtgaaaaccacaaccgtcag
gtcaggaccaggaaggtgatcatgcccgccgagatcatgcgtctccccgtaggtaccggc
tacttcatgttgccggggggcaaccctgcaaaggtgcatatacccctgaccgacgccaat
aaatgtccggtcgtgcaccggcctttccttttacgtcccggtctttccctggacgaactt
gaggctaagaattgcgagatttctgtcatggcccaaaacgccctggctggtccgccactg
gaggaactgaagatacccgcaattaaggagacggccaaagatgcatatccacccctgaaa
ctggtgaaggggaacttgaccccggacgcaacgccggtacggcctgagaacgtactccac
aggaatgaggccgagcctgattttcctgaggatacgccatga
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