Geomonas paludis: M1B72_11720
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Entry
M1B72_11720 CDS
T08160
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
gpl
Geomonas paludis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_50
HTH_8
PAS_4
PAS_9
PAS
Mg_chelatase
AAA_2
AAA
PAS_8
AAA_5
MCM
AAA_16
DUF6296
nSTAND3
DUF790
HTH_38
Cro
HTH_28
HTH_23
YdaS_toxin
Motif
Other DBs
NCBI-ProteinID:
UPU34123
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Position
2772677..2774458
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AA seq
593 aa
AA seq
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MTIMADFVGETAPTPEQTHQDAFNAAQYNAMGDGIISVNTAGTVLLSDRVSRVSLDIYPG
SSLSEQFPALWSKVVETMRDRRPRFELSVQRGETSFLVTVSPVMVDDEVSGAICVFVENT
DLEIMTRQLRSFRELTKELTAIIDSSSEGLWVFDGYGVVLRVNPAAERNNRVKKEVVVGL
TARELIEQGYMERSPALEVLGSKGVVNMLVNEGNRKLIVTGTPVFGDEGGIIRVVVSERD
ITEIDKLQRELEDQEAIKGQFWHHMLEQQQAELASQTIIAKSPRMITALRQAVKVSSADS
TVLIHGESGVGKGLFADLIHKNSSRSAKPIIKLNCGAIPESLIESELFGHERGAFTGAQT
AKPGYLELADNGILFLDEIAELPLASQVKLLRFLEDGRVTRLGGTTGRTVDVRIIAATHR
DLEKMVVEKTFRLDLYYRLNVIPLYIPALRERQECLLPLIRHYLDYFSQKVGKQKRLARA
ALDALLAYSYPGNVRELMNLCERLVVMSETEVIDLQDLPKQLFGSLEEKPLSQSEQTLPV
WPGDMTLEQILESVERTLLSDAMKEHGNQYRIAEALGINQSTVARKLKKYGIS
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgacgataatggccgatttcgtgggcgaaaccgcccccaccccggagcagacccaccag
gacgcattcaatgcagcgcagtacaacgccatgggcgacggcatcatctcggtgaacacc
gccggaaccgtgctgctgtccgaccgggtcagtcgcgttagcctcgacatctacccgggc
agttccctgagcgaacaattccccgcgctatggagcaaggtggtggagaccatgcgcgac
cgcaggccccgcttcgagctgtcggttcagaggggggaaacaagcttcctggtcacggtg
agcccggtgatggtcgacgacgaggtatccggcgccatctgcgttttcgtggagaatacc
gatctcgagatcatgacccggcagttgcggtcgttccgggaactaaccaaggagctgact
gccatcatcgactcctcctcggaggggctctgggtattcgacggctacggtgtggtgctg
cgcgtcaatccggccgccgaacgcaacaaccgggtcaagaaggaggtggtggtcggcctg
accgcgcgcgaactgatcgagcagggatacatggaacgctcgcctgccctggaagtactc
gggtccaagggcgtggtcaacatgctggtcaacgaaggaaaccgcaagctcatcgtcacc
ggcacgccggttttcggcgacgaagggggcatcatcagggtggtggtctcggagcgggac
atcaccgagatcgacaagctgcagcgggaactggaggaccaggaagccatcaaggggcag
ttctggcaccacatgcttgagcagcagcaggccgaactcgcctcccagaccatcatcgcc
aagagcccgcgcatgatcaccgccctgcgccaggcggtcaaggtgagctccgccgactcc
accgtgctgatccacggtgaatccggcgtcggcaaggggctctttgccgacctgatccac
aagaattcgagccgcagcgccaagcccatcatcaagctcaactgcggcgccatcccggag
tcgctcatcgagtcggagctcttcgggcacgagcgcggcgccttcaccggcgcccagacc
gccaagcccggctacctcgagctcgccgacaacggcatcctcttcctggacgagatcgcg
gaactgccgctggcctcacaggtgaagcttttgcgctttctcgaggacgggcgcgtgacg
aggctcggcggcaccaccgggcggaccgtcgacgtgcgcatcatcgccgccacacaccgc
gacctggaaaagatggtggtggaaaagaccttccgcctcgacctctactaccgcctcaac
gtgatcccgctctacatccccgcgttgcgcgagcgccaggaatgcctgctgccgctcatc
cgccattacctcgactatttcagccagaaggtcggcaagcagaagcggctggcccgcgcc
gccctcgacgccctgctcgcctacagctatcccggcaacgtacgcgaactgatgaacctg
tgcgagcggctggtggtcatgtccgagaccgaggtgatcgacctgcaggacctccccaag
cagcttttcggcagcctcgaagaaaaaccgctgtcgcagtcggagcagaccctgccggtg
tggccaggggacatgaccctggagcagatcctggaaagcgtggagcgcacgttgctgagc
gacgccatgaaggagcacggcaaccagtaccggatcgccgaggcactggggatcaaccag
tccaccgttgcccgcaagctcaagaagtacggcatttcctag
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