Glutamicibacter protophormiae: JQN66_02445
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Entry
JQN66_02445 CDS
T07442
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gpr
Glutamicibacter protophormiae
Pathway
gpr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gpr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JQN66_02445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gpr03019
]
JQN66_02445
03400 DNA repair and recombination proteins [BR:
gpr03400
]
JQN66_02445
Enzymes [BR:
gpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JQN66_02445
Messenger RNA biogenesis [BR:
gpr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JQN66_02445
DNA repair and recombination proteins [BR:
gpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JQN66_02445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HTH_IclR
MRFAP1
HEM4
Motif
Other DBs
NCBI-ProteinID:
QRQ79133
LinkDB
All DBs
Position
504634..506754
Genome browser
AA seq
706 aa
AA seq
DB search
MDASLHSDLLTSATAKLRALVRNPDAQFHDGQFEAISALVAQRRRALVVQRTGWGKSAVY
FIASLLLREQGYGPTLIVSPLLALMRDQVAAAERAGVRAAAINSANVLEWREILDKLQRD
EIDVLLVSPERLNNPSFREQQLPMLLNRLGLLVIDEAHCISDWGHDFRPDYRRIRDLINR
LPAGLPVLATTATANSRVVEDVAEQLAGGAGDVFTLRGTLARDSLRLGVLRLPSPRMQLA
WLLSHIEDFTGSGIIYTLTVSAAEDIARMLREAGHQVAAYTGRTDLEERERLEQALKANE
VKALIATSALGMGFDKPDLGFVIHIGAPSSPVAYYQQVGRAGRGSINADVLLLPGADDAE
IWEYFATSSMPDQVRATAVLEALGQADGAMSVPALESAVNLRRSPLELLLKVLAVDGAVE
RVAGGWMRTDLPWSYDADRYKRVAASRVHEQRLMIDYENTRGCRMEFLTTSLDDPRSAPC
GRCDNCAGAWYDDHIPEESKDNAQNALGRAGVSIEPRKLYPSGLNRLGHTLKGKIPEDEQ
VSIGRALARLTDLGWGNRLRQLFADPADHPIDKAMFEACIKVLSEWNWDQRPVGVVAMPS
STRPQLVTSLAQQLASVGRLRYLGQLEYRGMPPQNGPGGNSAFRVAAVADAFEIPEPLEA
LLADAPGPVMLVDDLTDSRWSLAMAGRALRIAGAPGVLPFTLGIAG
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggatgcctcactgcactcggacctgctgacctccgccacggccaagctgcgcgccctg
gtgcgcaacccggacgcgcagttccacgacggccagttcgaagcgatcagcgcgctggtc
gcccagcgccgccgcgccctggtggtgcagcgcaccggctggggcaagtccgcggtgtac
ttcatcgcctcgctgctgctgcgcgagcagggctacgggccgacgctgatcgtctccccg
ctgttggcgctgatgcgcgaccaggtggccgccgccgaacgcgccggcgtgcgcgccgcg
gccatcaactccgcgaatgtgctggagtggcgcgaaatcctggacaagctgcagcgcgac
gagatcgacgtgctgctggtttccccggaacggctgaacaacccctccttccgcgaacag
cagctgccgatgctgctgaaccggctgggcctgctggtgatcgacgaggcgcactgcatc
tccgactgggggcacgacttccgccccgattaccgccgcatccgcgacctgatcaaccgg
ctgccggccgggctgccggtgctggcgaccaccgcgacggccaactcccgcgtggtggag
gacgtggccgagcagctggccgggggagcgggcgacgtgttcaccctgcgcggcacgctg
gcccgcgactcgctgcgcctgggggtgctgcgcctgccctcgccgcgcatgcagctggcc
tggctgctgagccacatcgaggacttcaccggttcgggcatcatctacacgctgacggtc
tccgcggcggaggacatcgcccggatgctgcgcgaagccggccaccaggtggccgcctac
accggccgcaccgatctggaagagcgcgagcggctggaacaggccttgaaggccaacgag
gtcaaggccctgatcgccaccagcgcgctgggcatgggattcgacaagccggacctgggg
ttcgtcatccacatcggcgcgcccagctcgccggtggcctactaccagcaggtcggccgc
gccggccgcggcagcatcaacgccgacgtgctgctgctgccgggcgccgacgatgcggag
atctgggagtacttcgccaccagctccatgcctgaccaggtgcgcgccaccgcggtgctg
gaggcgctgggccaggccgacggcgcgatgagcgtgccggcgctggaaagcgcggtgaac
ctgcgccgctcgccgctggaactgctgctgaaggtgctggccgtggacggcgccgtggaa
cgcgtggccggcggctggatgcgcaccgacctgccctggtcctatgatgcggaccgctac
aagcgcgtggccgcgagccgcgtgcacgagcagcggctcatgatcgactatgagaacacc
cgcggctgccgcatggagttcctgactacgtccctggacgatccgcgctccgcgccgtgc
ggacgctgcgacaactgcgccggcgcctggtacgacgaccatattcccgaggaatccaag
gacaacgcgcaaaacgcgctgggccgcgccggggtgagcatcgagccgcgcaagctctac
ccgtcggggctgaaccgtctgggtcacacgctcaagggcaagatcccggaggacgagcag
gtctcgatcggccgggcgctggcccgactgaccgacctgggctggggcaacaggctgcgc
cagctcttcgccgatcccgccgaccacccgatcgacaaggccatgttcgaggcctgcatc
aaggtgctgtcggaatggaattgggaccagcgcccggtgggggtggtggccatgccgtcc
tcaacccgcccgcagctggtcacctctctcgcccagcagctggcctccgtggggcgcttg
aggtacctgggccagctggagtatcgcgggatgccgccgcagaacggcccgggcgggaac
tcggccttccgcgtcgcggcggtggccgatgcctttgagatcccggagccgctggaagcg
ctgctggccgatgcgccgggcccggtcatgctggttgacgacctgaccgattcgcgatgg
tcgctggccatggccggcagggctttgcgcatcgccggggctcccggtgttttgcctttc
actttgggaatcgctgggtaa
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