Paraglaciecola psychrophila: C427_0859
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Entry
C427_0859 CDS
T02535
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
gps
Paraglaciecola psychrophila
Pathway
gps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C427_0859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gps03400
]
C427_0859
DNA repair and recombination proteins [BR:
gps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C427_0859
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C427_0859
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Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AGH42968
UniProt:
K7AUX2
LinkDB
All DBs
Position
794855..795592
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AA seq
245 aa
AA seq
DB search
MLPEQLTGFVLHRRSYRETSYLTDLFTLELGKVSAVARGVRGNKGDKKSLLQSFQPLLLS
VTGKHELRNLHQLESAGSRLQLVGHQLFSAMYLNELLNRLLPKEVPHPELFLCYQQSLQW
LANGGDIEPCLREFELSLLNDMGYGIDLTQEYESGETVEPNVDYCLVLESGIRRIDVNAL
GTNRFSGEALLQVSNNLWTPNSLQCAKRITRMALSPLLGRKPLKSRELFQQTWTAARPAN
IGKFK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
ttgctacctgagcagcttactggctttgtgttacatcgacgctcatatcgagaaaccagc
tatttaaccgatttatttactcttgaactaggtaaagtcagcgccgttgccaggggtgtc
cgaggcaataaaggcgacaaaaaaagtttattgcaatcatttcaaccgttgctgctatcc
gttacgggtaaacatgaattgcgtaacctccatcaactagagtcagccggttccagattg
caacttgttggtcatcagttattttcagccatgtatttgaatgagttactcaatcggctg
ttgccaaaagaagtgcctcatccagagttgtttttatgctatcaacaaagcctgcagtgg
ttagcgaatggcggagatatcgaaccttgcttacgtgagtttgaattgtcgctgttaaat
gatatgggctatggtattgatttaacacaagaatatgaaagtggagaaactgttgagcct
aatgttgattattgtttggtcctagagagcggtatcagacgtattgacgttaatgcacta
ggaactaatcgattcagcggagaagcattgttacaagtaagtaataatttatggacgccg
aacagtctacaatgtgcaaagcgaattaccagaatggcactctcgccgctactaggccga
aaaccgctaaagagcagagagttgtttcaacaaacttggacggctgcaagaccagccaat
attgggaaatttaaatga
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