Gossypium raimondii: 105764706
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Entry
105764706 CDS
T04129
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gra03400
]
105764706
Enzymes [BR:
gra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105764706
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
105764706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
ResIII
Helicase_C
AAA_22
T2SSE
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
105764706
NCBI-ProteinID:
XP_012438858
LinkDB
All DBs
Position
12:complement(48868436..48897387)
Genome browser
AA seq
2091 aa
AA seq
DB search
MLVQLPRLTNSLREPFDIDQAYLQRKIILETQKKAINSGNPLDESELARKIVHRWEEAAS
VEVRQVYKQFIGAVVELIDGDVPSEEFREVVLTAYRLFGGSVEEGEVDKNINEKTVELQK
VIGHGVSHANVRKVSSLAQKLSQSQPRDSGAILGSEKHVDGSGDDSEFGADLAFKAPARF
LVDVSLEDVELLGEESIAPSSSFIEGWHDKNGPRNYHGNTDSRNFNLSWLRDSCELIVRG
STSQLSRDDLAMAICRVLDSDKPGEEIAGDLLDLVGDSAFETVQDLLSHRKELVEAIHHG
LSVLKSEKMTSSSQSRMPSYGTQVTVQTESEKQIDKLRRKEEKRNRRATEYGAESDMSAA
SFSSLLQASEKRSPFEDLIGSGQGSNSVAVTALPQGTVRKHFKGYEEVIIPPTPTAQMKP
GEKLIEIKELDDFAQAAFRGYKSLNRIQSRIFQTVYHTNENILVCAPTGAGKTNIAMISI
LHEIGQHFKDGYLHKDEFKIVYVAPMKALAAEVTSTFSQRLSPLNMCVRELTGDMQLSKN
ELEETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQ
VESTQSMIRIVGLSATLPNYLEVAQFLRVNAETGLFFFDSSYRPVPLAQQYIGISEQNFV
ARNELLNEKCYKKVVDSLRQGHQAMVFVHSRKDTVKTAEKLVELARKYEGLELFKNDAHP
QFSLIKKEVVKSRNKDLVQLFDFGVGVHHAGMLRSDRGLTERLFSDGILRVLVCTATLAW
GVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLA
YYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLAYG
IGWDEVVADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSS
VETYNEMLRRHMSDSEVIEMVAHSSEFENIVVREEEQNELEMLARTSCPLEVRGGPSNKH
GKISILIQLYISRGSIDSFSLVSDAAYISASLARIMRALFEICLRRGWCEMTLFMLDYCK
AVDRQIWPHQHPLRQFDKDLSLEILRKLEERGADLDRLQEMEEKDIGALIRYAPGGRLVK
QYLGYFPWVQLSATVSPITRTVLKVDLLISSDFIWKDRFHGAAQRWWILVEDTENDHIYH
SELFTLTKKMARTESQKLSFTVPIFEPHPPQYYIRAVSDSWLYAEAFYTISFQNLRLPEA
RTTHTELLDLKPLPVTSLGNSTYESLYSFSHFNPIQTQIFHVLYHTDNNVLLGAPTGSGK
TISAELAMLHLFNTQPDMKVIYIAPLKAIVRERMHDWRKRLVSQLGKEMVEMTGDYTPDL
MALLSADIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRY
ISSQTERAVRFVGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKYYC
PRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQYAASDENPRQFLSMPEEA
LQMVLSQVTDQNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNMIQVLVCTSTLAWGVNL
PAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKK
FLYEPFPVESSLREQLHDHMNAEIVSGTICHKEDAVHYLTWTYLFRRLMVNPAYYGLESG
EDETLSSYLSRLVQSTFEDLEDSGCIKMTEDSVEPMMLGTIASQYYLSYMTVSMFGSNIG
PDTSPEVFLHILSGASEYDELPVRHNEENYNEALSKRVRYMVDQNRLDDPHVKANLLFQA
HFSQLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLTSSIACMHLLQMVMQGLWFD
QDSALWMLPCMNNELAGSLCKRGISTIQQLLDLPKATLQTVIGNFPASKLYQDLQHFPCI
RVKLKLLKKGTESKKSLQLNVRLEKTNLRRNMSRAFAPRFPKIKDEAWWLILGNTSTAEL
YALKRVSFSDRLVTHMELPSDVTLIQGMKLIIVSDCYLGYEQEHSIENLAA
NT seq
6276 nt
NT seq
+upstream
nt +downstream
nt
atgttggttcagcttcctcggttgacaaattctttaagggaaccgttcgatatcgaccaa
gcttatctccagcgcaagatcatccttgaaacccagaaaaaagctatcaactcgggaaac
ccacttgatgagtcagagcttgcaaggaagatagttcatcgatgggaagaagcagcttct
gtagaagtgagacaagtatacaaacagttcattggggcagtggtggagctgattgatgga
gatgtaccttctgaagagttccgtgaggttgtgttgactgcttatcgtctttttggtggg
tcagtggaagagggtgaagttgataaaaacataaacgagaagacggtagaattgcagaaa
gttattggtcatggagtttcacatgctaatgtgcggaaggtgtcctctttggcacagaag
ctatctcagtctcaaccaagagacagtggggccatacttggttctgaaaagcatgtagat
ggaagtggagatgattcagaatttggtgctgaccttgcctttaaagcaccagcccggttt
ttggtggatgtttctttggaggatgtggaattactgggtgaggaaagtattgcaccttct
tcttcatttattgaaggatggcatgataaaaatggccctagaaattatcatggcaatact
gatagtagaaacttcaatttaagttggttaagagattcatgtgaactaattgttagaggg
agtacttcacagctttcacgagatgacctggctatggcaatctgtcgggtacttgattca
gacaaacctggtgaagagatagctggcgatttattggaccttgtcggggatagcgcattt
gaaactgttcaagaccttttatcgcatcgaaaggagcttgttgaagctattcatcatgga
ttatctgtattgaaatctgaaaaaatgacttcaagttctcagtcacgcatgcccagctac
gggacccaggttactgtccaaacagagtctgagaagcagattgataaactgcggcgcaag
gaggaaaagcgtaacagacgtgcaactgaatatggggctgagagtgacatgtcagctgca
agcttttcttcgttacttcaagcgagtgagaagagaagtccgtttgaagatttgattgga
tctggtcaagggtctaattctgtggcagtaactgcccttccacaagggactgtaaggaag
cattttaaggggtatgaggaggtgattatacccccaacaccaactgctcaaatgaaaccc
ggggaaaagctgattgagataaaggagttggatgactttgctcaagctgcttttcggggt
tacaaatctctgaatcgtattcagagtcggatattccaaaccgtatatcacactaatgag
aatatattagtttgtgcaccaactggagcaggcaagacaaacatagccatgatatctatc
ctacatgagattgggcagcatttcaaggatggctacttgcataaagatgaatttaagatt
gtttatgttgctcctatgaaggcattagctgctgaggtcacatcaacatttagtcaacgc
ttatctccattgaatatgtgtgtgagagaacttactggagacatgcaactttctaagaat
gaacttgaagaaactcagatgatagttacaacacctgagaaatgggatgttattactcgc
aaaagtagtgatatgtcactctcaatgctggtgaagctcttgattattgatgaagtgcat
cttctaaatgatgatagaggtccagtaatagaagctctagtggctagaactcttcgtcag
gtggagtcgacacagtcaatgatacgaattgttggcctttcagctactctacctaattac
ttagaggttgcacagttccttagagtgaatgcagagactggcctttttttctttgattct
agttatcgtccagttccgcttgctcaacaatatattggaattagtgagcagaactttgtt
gcccgtaatgaattgttgaatgagaaatgctataagaaggtggttgattccttaaggcaa
ggtcaccaggcgatggtgtttgttcattcaaggaaggatactgtcaaaacagctgagaag
ctggttgagcttgctcgaaagtatgagggtcttgagcttttcaagaatgatgcccatccc
cagttctccttaatcaagaaggaggttgttaagtcaagaaacaaagatctagttcagctt
tttgatttcggagttggtgtgcatcatgctggtatgttacgttctgatagggggcttact
gagaggcttttctctgatggaatcttgagggtacttgtttgcacagctaccttggcctgg
ggtgttaatttgcctgctcacacggttgtcatcaaggggactcaattatatgatccaaag
gctggtgggtggcgagacctgggcatgctagatgttatgcagatatttggaagggcaggt
cgacctcagtttgacaaaagtggtgagggcatcataattacatctcatgacaaactagcc
tactatctgcgattgttgacaagccaacttcctatagaaagtcagtttatcagctcgttg
aaagataatttaaatgcagaggtagcattgggtactgtaactaatgtcaaggaggcttgc
gcatggcttgggtacacctatctatttatcaggatgaggttgaacccactggcatatggc
attggatgggatgaggttgtggcagatccttctttgagtttaaagcaaagagctctagta
acagatgctgcacgtgcactagacaaagctaaaatgatgcgttttgatgagaaaagtggg
aatttctattgtacagagcttggtcgtattgcaagtcacttctatatccaatattctagt
gttgaaacttacaatgaaatgctgaggcgccatatgagtgacagtgaggtaattgaaatg
gttgcccattcttctgaatttgaaaacattgttgttcgagaagaggagcagaatgagcta
gagatgctggcgcgcacatcatgcccattagaagttaggggggggccttcaaacaagcat
gggaaaatttcaattctcattcagctgtacatatcacgtggctccattgattccttttca
ttggtatctgatgctgcatatataagtgctagtttggctcgcatcatgcgtgctttgttt
gaaatatgcttgcgcagaggctggtgtgagatgacattattcatgttggactactgcaag
gctgtggatcgccaaatttggcctcatcaacatccactcagacaatttgataaagatctt
tcactagaaatattaaggaagcttgaagaacgaggggctgacttagatcgtcttcaggag
atggaagaaaaagacattggtgcactgattcgttatgcacctggaggaaggttggttaag
caatatttaggatatttcccttgggtccagttatcagcgactgtgagtccaataactagg
actgttttaaaggtggatttgcttatatcttctgattttatttggaaagaccgatttcac
ggtgctgcacaacgttggtggatacttgttgaggacactgagaatgatcacatctaccac
tcggagctttttacactgacaaagaagatggctagaacagaatctcagaagctttccttt
actgtaccaatatttgaaccacatcctcctcagtactacattcgtgctgtttctgattct
tggttgtatgctgaggctttctacaccatatcattccaaaatctaagactgccagaggct
cgtaccactcatacagagcttcttgatttgaagcctctgcctgtaacttcactcggcaac
agcacttatgaatcattgtatagcttttcacattttaatccgatacagacgcagatcttt
catgtcctgtatcacacagataacaatgttctattaggagctcctacgggtagcgggaaa
actatatcggctgaacttgctatgctgcacctcttcaatacccaacctgatatgaaggtt
atctacatagcacctttgaaggccattgtacgggaaaggatgcatgattggaggaagcgt
cttgtctctcagcttgggaaagaaatggttgaaatgactggagattatactccagattta
atggcccttttgtctgctgatattatcatatctactcctgaaaagtgggatggtattagt
cggaattggcatagtcgaagctatgtcacaaaggttggacttatgatattggatgagatt
cacttactgggagctgatcgtggacccatccttgaggttattgtttcaaggatgagatac
atatcatcacaaacagagcgtgcagtgcggtttgttgggctctccacggctttggcaaat
gcaggtgatttggctgattggttgggtgttggtgaaattgggctcttcaactttaaacca
agtgtgagacctgtacctcttgaagttcatatccagggatatcctggaaagtactactgt
ccaagaatgaatagtatgaataaaccagcatatgctgcaatatgcacccattcaccgacg
aaaccagttcttatttttgtttcgtctcggcgtcagacaaggctgactgctttggacctt
attcagtatgcagcatcagacgaaaatccaaggcaatttttgagtatgccagaagaagct
ttgcagatggtactttcccaggttactgatcagaacctgaggcataccttacagtttggc
attggattgcatcatgctggactaaatgacaaagatagatctcttgttgaggagcttttt
gccaacaacatgatccaggttttggtttgtacaagcacattagcttggggtgtaaatctt
ccagcccatttggttattatcaagggaacagagtattatgatgggaaaacaaagaggtat
gttgatttccccattacagatattttgcaaatgatgggtcgagccggtcgtcctcaatat
gatcagcatgggaaggcagttattcttgttcatgaacccaaaaagagcttctacaaaaag
ttcctatatgaaccatttccagttgagagtagcctgagggagcagttgcatgatcacatg
aatgcagagattgtttctggaacaatatgtcataaagaagatgctgttcattatcttact
tggacctacttgttccggagactgatggttaatcctgcatactatggcttggaaagtgga
gaagatgaaacattgagttcgtatttgtccagattggtgcaaagcacctttgaggatcta
gaagatagtgggtgcatcaaaatgactgaagacagtgtagagcctatgatgttgggaaca
atagcatctcagtattaccttagttacatgactgtatcaatgtttgggtcaaacattgga
ccagacacgtctcctgaagtgttcttgcatattttgtcgggtgcttccgagtatgatgaa
cttcctgtgcgacataatgaggagaactataatgaagcattgtctaagagagtccggtat
atggtggatcaaaatcggcttgatgatccacatgtcaaagcaaaccttctattccaggcg
catttttcccagttagatttaccaatcagcgactatgtgactgacttaaagtcagtgttg
gaccaaagcatacgcatcattcaagctatgatagatatatgtgccaatagtggatggctt
acaagttcgattgcttgcatgcatctattgcagatggtcatgcagggtttgtggtttgat
caggattcagccctctggatgttgccgtgtatgaataatgaacttgctggctcattgtgc
aagagaggaatttccaccatacagcaactattagatcttcctaaggcaacattgcaaact
gtgattggaaatttccctgcttcaaaattatatcaggatctgcagcatttcccctgtata
cgagtcaaattaaaactgctgaagaagggcactgagagcaaaaagtctcttcaactgaac
gtcagattggagaagacaaatttgaggcggaatatgtcaagggcatttgcccctcgtttc
cctaagattaaagatgaagcatggtggctgattcttggtaacaccagtactgctgaacta
tatgctctgaagagagtttctttctccgatcgcttagttacccacatggagttaccatca
gacgtgaccttgattcaggggatgaagctaattatagtttcagattgctatcttggttat
gagcaagaacactccattgaaaatcttgctgcataa
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integrated database retrieval system
