Gossypium raimondii: 105799047
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Entry
105799047 CDS
T04129
Name
(RefSeq) eukaryotic initiation factor 4A-2
KO
K03257
translation initiation factor 4A
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105799047
03012 Translation factors [BR:
gra03012
]
105799047
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gra04147
]
105799047
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105799047
mRNA cycle factors
Stress granule specific factors
105799047
Translation factors [BR:
gra03012
]
Eukaryotic type
Initiation factors
eIF-4
105799047
Exosome [BR:
gra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105799047
Exosomal proteins of bladder cancer cells
105799047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
CMS1
DUF2780
Motif
Other DBs
NCBI-GeneID:
105799047
NCBI-ProteinID:
XP_012484830
UniProt:
A0A0D2SUN2
LinkDB
All DBs
Position
9:32240215..32243478
Genome browser
AA seq
413 aa
AA seq
DB search
MAGVAPEGSQFDARQFDQKMSDLLQTDGDDFFTSYDEVYDSFDAMGLQENLLRGIYAYGF
EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGIVQCQALVLAPTREL
AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRP
DYIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVR
ILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
SRDHTVSATHGDMDQNTRDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYLHRIGRSGRFGRKGVAINFVTVDDERMLFDIQKFYNVVIEELPSNVADLL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgtagcacccgaaggatcccaattcgatgctcgtcaatttgatcagaaaatg
agtgatttgctccaaacggatggagatgattttttcacttcttatgatgaagtttatgac
agttttgatgcaatgggacttcaagagaaccttctgaggggcatctatgcatatggtttt
gagaagccctcagcgattcagcaaagaggaattgttccattctgcaagggtctcgatgtg
atacaacaggcacagtctgggaccggaaagacagcgactttttgctctggaattttgcag
caacttgattacggtatagtccaatgccaggctctggttttggcacccactagggagttg
gctcaacagatcgagaaggtgatgcgggcacttggtgattaccttggtgtgaaggtccac
gcttgtgttggtgggactagtgttcgcgaggatcagcgaattcttcaaagtggtgttcat
gttgttgtcggtacacccggtcgtgtcttcgatatgttgagaaggcaatcactccgtcca
gattatattaagatgtttgtcttggatgaggctgatgaaatgctttcccgtggttttaag
gatcagatctatgatatcttccagcttcttccgggcaagattcaggttggggtattttct
gctacaatgccacccgaagccctagagatcactcggaagttcatgaataaacctgtgaga
attttggttaagcgcgacgaactaaccctggagggtatcaagcagttttatgtgaatgtt
gaaaaggaagagtggaagctcgaaacactctgcgatctctatgaaacactggccattacc
caaagtgtcattttcgtgaacacgaggcgcaaggttgactggctaactgacaagatgcga
agtcgagaccacacagtttctgccacccatggagatatggaccagaatacgcgagatgtc
atcatgcgggaattccgttctggttcttcccgtgttctcatcactaccgatctgttagcc
cgtggtattgatgtgcagcaagtctcccttgtcataaactacgatctgcccactcaacca
gaaaactacctccaccgaatcggacgaagtggaaggttcgggagaaaaggtgttgccata
aactttgtgactgtagatgatgaaagaatgctgtttgatatccagaagttctacaatgtt
gtcatcgaggagctgccatcgaatgtcgcggatctcctttga
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