Geotrypetes seraphini (Gaboon caecilian): 117358169
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Entry
117358169 CDS
T09159
Symbol
COL10A1
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
117358169
NCBI-ProteinID:
XP_033795657
UniProt:
A0A6P8QGB2
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Position
3:1057803..1126544
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AA seq
663 aa
AA seq
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MKLPSLLLIFLSSLGSLHGGVYYSKQNSVKGPLYSPYNVKSQALQGKEQRGSSGPPGPPG
PRGHLGPPGPQGKTGYGSPGPQGPPGLPGPQGFSAVGKTGLPGLPGKPGDRGFPGDKGDV
GLTGFPGPRGLQGPSGNPGPAGISAVGKIGPPGVPGSPGPRGAPGLKGEMGMPGINGLKG
ENGYGVPGRPGERGPPGLQGQPGPAGINGNGKPGERGLQGLPGKHGDRGLPGEPGLPGIP
GNRGSQGEPGLPGIGKPGITGVPGLPGPPGHKGITGPPGLPGPPGLQGFGKPGVPGIKGQ
KGHEGPPGVSGIKGEQGPAGLLGAPGIPGEPGNVGPQGQKGLPGEPGQLGPKGEVGARGP
PGYPGLKGERGLPGMEGKPGYPGEQGLAGLKGHPGLPGQKGDTGSVGHPGLPGVPGAIGL
KGVPGYNGDQGPRGPPGISGMKGPAGPPGIPGLPGHKGEPGVPGLPGQAAIPTKGMIGPI
GPPGIPGPRGINGEPGLPGPPGPPGSPGQTIFSEQIPTGYMKTGQIPALTGKPVSAFTAM
LSKAFPLTGFPVKFDKILYNQQQHFDPRTGIFTCRIPGLYYFAFHVHVKGTHVWVALYKN
SKPVMYTYDEYKKGYLDQTSGSAILELTENDQVWLQLPSTESNGLYASEYVHSSFSGFLF
GST
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaccttcactactgctgatattcctctcatcgctaggctcactccatggaggt
gtttattactcaaagcagaatagcgtgaagggtcctttgtattcaccgtacaatgtgaaa
agtcaggctttgcaaggaaaggaacaacgaggatcttctggcccaccgggaccacctggc
cctagagggcatctaggaccccctggaccacaggggaagacgggatatggaagtccaggc
ccacagggtcctccaggtctcccaggaccacagggattttctgcagttggaaaaacaggt
ctaccaggtcttccaggaaagccaggggataggggatttcctggagataaaggagatgtg
ggactcactggattcccaggaccaagaggactacaaggaccatcaggaaatccaggtcct
gctggaatttctgctgttggaaagataggccccccaggagtaccaggttcaccaggtcca
agaggtgctccaggactgaaaggagaaatgggcatgcctggtataaatggattaaaagga
gaaaatggttatggtgtcccaggtcgtccaggtgaaagaggtcctccaggactgcaagga
caaccaggacctgctggaataaatggcaatggaaaaccaggtgaacgtggacttcaaggg
ctgccaggaaaacatggtgaccgagggttacctggtgaaccgggacttccaggcattcca
ggaaatcgagggtcccaaggagagcctggtctaccagggattggaaaacctggaattact
ggagtaccaggcttgccagggcctcctgggcataaaggaataactgggcctccaggtcta
cctgggcctccagggctacagggttttggtaaaccaggtgtaccagggattaaaggacag
aaaggacatgaaggccctccaggtgtttcagggattaaaggggaacaagggccagctggt
cttctaggagcaccgggtatacccggagaaccaggaaatgtaggacctcaaggacagaaa
gggttaccaggggaacctggtcaactaggacctaaaggtgaagtaggagctcgaggacca
cctggatatcctgggctgaaaggtgaaagaggtttaccaggcatggagggaaaaccaggt
tacccaggggagcagggtcttgctggccttaaaggacacccaggtttaccaggccagaaa
ggagacactggctctgtaggtcatccaggtcttcctggtgtacctggtgcaataggactt
aaaggggtacctggatacaatggtgatcaaggccccagaggacctcctggaatatcaggt
atgaagggtcctgcagggcctccaggcattcctggacttcctggccataagggagaacca
ggagtgcccggccttccagggcaagctgccattcctacaaaaggtatgattggaccaata
gggccacctggaattccagggccaagaggtattaatggggagccaggtctgcctggtcct
cctggtccacctggatcaccgggccaaacaatattttctgagcaaataccaactggctat
atgaagacagggcaaattccagcattaacaggaaagcctgtgtcagctttcacagccatg
ctttcaaaagcctttccactgacaggatttcccgtgaaatttgacaaaatcctgtacaat
cagcagcagcattttgatcccagaactggaatatttacctgcaggatcccaggactttac
tattttgctttccatgttcatgtgaaaggaactcatgtctgggttgccctgtataagaat
agcaaaccagtcatgtatacatatgatgaatacaagaaaggttatctggaccagacctca
ggaagcgccattttagaattaactgaaaatgatcaagtctggctacagttaccgagtaca
gaatccaatggcctgtacgcttcagagtatgttcattcctccttctctgggtttttattt
ggctccacatga
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