Geotrypetes seraphini (Gaboon caecilian): 117367357
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Entry
117367357 CDS
T09159
Symbol
LMX1A
Name
(RefSeq) LIM homeobox transcription factor 1-alpha
KO
K09371
LIM homeobox transcription factor 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117367357 (LMX1A)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
117367357 (LMX1A)
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
HTH_32
Motif
Other DBs
NCBI-GeneID:
117367357
NCBI-ProteinID:
XP_033815694
UniProt:
A0A6P8SBT1
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Position
10:complement(116087456..116536084)
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AA seq
381 aa
AA seq
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MLDGLKMEDNLQTDIKTSATFSSLLGQDLKQKSVCEGCQRVICDRFLLQLNDTLWHERCV
QCALCKESLESSCFYREKRLYCKQDYEKLFAVKCGGCFEVIAPNEFVMRAQKSVYHLTCF
SCCVCERQLQKGDEFVLKEDQLLCRYDYEKEQELLSLVSPMTSDSGKSDDEGSLCKAEHG
TEKGVEDCKDIKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQV
WFQNQRAKMKKLARRQQQQKQQDQQNPQRINSEQTNGGSSSNIETIMNQYAALPPQHLLA
IEQNIYKSDPFRQGLTPPEMPGDHMHPYGNKPLFHDMDSDDTSLHNLGDCFLVTSEVGTM
QTRMGNPIDHLYSMQNSYFTS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgttggatggattgaaaatggaagataatttgcaaactgacatcaaaacgtcggcaact
ttctcctcacttctggggcaagatctgaagcagaaatcagtttgtgagggctgccagaga
gtgatttgcgaccggttcctgcttcaactgaatgacactttgtggcatgagcgctgtgtg
cagtgtgctctgtgcaaggagtccctggaaagcagctgcttctaccgggaaaagagactc
tactgcaagcaggactatgaaaagttgtttgctgtgaagtgtggcggctgctttgaagtc
attgcccccaatgagtttgtgatgcgtgcacaaaagagtgtttatcatctgacctgcttc
tcctgctgcgtgtgtgaaaggcagctacagaagggtgatgagtttgtactcaaggaggat
cagctgctctgcagatatgactatgaaaaagaacaagaacttctgagccttgtcagcccc
atgacttctgactcaggtaaaagtgatgatgagggaagtctatgcaaagcagaacatggt
acagagaaaggagtagaagattgcaaagatatcaaacgcccaaagcgacccagaacaatt
ctgactacacagcagagaagagcattcaaagcttcatttgaggtctcctccaaaccatgt
aggaaggtaagagagacattggcagcagagactggattaagcgttcgagttgtacaggtt
tggttccagaaccaaagagcaaagatgaagaagctcgctaggaggcaacagcagcagaag
caacaggatcagcaaaatcctcagagaatcaattcagagcaaacaaatggtgggagcagc
tcaaatatagaaacaatcatgaatcagtatgcagcactgcctcctcagcatcttctagcc
attgagcagaatatttataaatccgatccatttcgacaaggactcactccacctgaaatg
cctggagaccacatgcatccctatggcaacaagcctctgttccatgacatggatagtgat
gacacttccctccataacctgggtgactgtttcctagtgacctctgaagttgggaccatg
cagacaagaatgggaaatccaattgatcatctctactctatgcagaattcctattttacc
tcctaa
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