Glycine soja (wild soybean): 114399833
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Entry
114399833 CDS
T06057
Name
(RefSeq) polygalacturonase At1g48100-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Module
gsj_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114399833
Enzymes [BR:
gsj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
114399833
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
Motif
Other DBs
NCBI-GeneID:
114399833
NCBI-ProteinID:
XP_028217851
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Position
19:47799423..47802284
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AA seq
459 aa
AA seq
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MFLQRITLFLIFITCLFFPTIRGKLHSHANGKQWLPMSRIWLPPSPSPEVVSPNANGPFV
FNVKSFGAVGDGVSDDTEAFKLAWDAACHAEESGTLFVPKGHIFMIQSTTFTGPCNSKLT
FKVDGTIWPPDGPDSWPLSSRKRQWLVFYRINGMLMQGSGLIDGRGEKWWNLSYKSHKGA
NGAKQLGPGDRPVAIRFFESSNLRVEGLKIKNSPKFHFRFDECQNVHVEKLIIKSPALSP
NTDGIHIENTTNVNIHNSVISNGDDCVSVGAGCYNVDIRNITCGPSHGISIGSLGNYNSR
ACVSNITVSDSIIKHSDNGVRIKTWQGGRGAVSKVVFNNIQMDTVRNPIIIDQYYCPSKN
CHNQSYAVSVSNVSYSNIKGTYDARSPPMRFACSDSVPCTNLTLSEVELLPAAHSQGKIL
TNPFCWKVYGTVQTLTTPHVLCLLEGNQLTLKPRDVVWC
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgcagagaattactcttttcttaattttcatcacatgtttgttctttcccaca
attcgtggcaaacttcacagtcatgcaaacgggaagcaatggcttccaatgtcacgtatt
tggttaccaccttctccttcacctgaggttgttagcccaaatgccaatggaccttttgtt
ttcaatgtaaaatcctttggtgctgttggggatggtgtctctgatgatacagaagcattt
aagttggcctgggatgcagcatgtcacgccgaagaatcaggaactctttttgttccaaag
ggtcatatcttcatgatacaatcaactacattcacaggaccttgtaattctaaactcact
tttaaggttgatggtactatttggcccccggatggaccggattcatggccattgagtagc
agaaagagacaatggctggttttctatagaataaatggaatgctaatgcagggaagtggt
cttattgatggaagaggagagaaatggtggaatctctcttacaaatcacacaaaggagct
aatggggcaaaacagcttggaccaggtgatcgtccagtggccatcaggttctttgagagc
tccaatttgagagtggaaggactgaaaatcaagaacagtcctaaattccatttccgattt
gatgaatgtcaaaatgtccatgtggaaaagcttatcataaagtcacctgctctaagtccc
aacaccgatggaattcacattgaaaacacaactaatgtcaatattcacaattcagtcatt
tcaaatggtgatgactgtgtgtccgttggtgccggttgttacaatgtggacataaggaat
ataacatgcggtccaagtcatggaataagcattggcagcctaggaaattacaattcgcga
gcttgcgtttccaacataacagtgagtgattcaattattaagcattctgataatggggtt
cggatcaaaacatggcagggtggaagaggagcagtgtctaaggtagtcttcaacaatatt
caaatggacactgtccgcaacccaatcatcatagaccaatactactgcccctccaagaac
tgccacaaccaaagctatgcggtttcagtttccaatgtttcatactcaaacataaagggt
acttatgatgcgaggtccccacctatgcgttttgcttgcagtgattctgttccatgcaca
aacctcacgctatctgaagtggaactgcttccagctgcgcactcacagggcaagattttg
accaacccgttttgttggaaggtttatggaactgtgcagacactcacaacaccacacgtt
ttatgcctcttagagggaaatcaattaaccttaaagcctcgagatgttgtttggtgttag
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