Glycine soja (wild soybean): 114417942
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Entry
114417942 CDS
T06057
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114417942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114417942
03009 Ribosome biogenesis [BR:
gsj03009
]
114417942
Enzymes [BR:
gsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114417942
Spliceosome [BR:
gsj03041
]
Complex A
U1 snRNP components
U1 related factors
114417942
Complex B
114417942
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
Pre-60S particles
Helicases
114417942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
114417942
NCBI-ProteinID:
XP_028238826
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All DBs
Position
7:803538..809552
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AA seq
507 aa
AA seq
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MSRYDSRSGDPTSYRDRRSDSGLGAPTGFGGSVQHSSSNRRDYDDGGSPKRNLSLDGLPH
FEKNFYVESPAVRAMTDAEVNEYRQQREITVEGRDIPKPVKSFHDAGFPEYVMEEITKAG
FTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPSIVHVNAQPILNPGDGPIVLVL
APTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLE
SNHTNLQRVTYLVLDEADRMLDMGFDPQLRKIVSQIRPDRQTLYWSATWPKEVEQLARKF
LYNPYKVIIGSSDLKANHAIRQYVDIVSEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCD
QITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVIN
YDFPGSLEDYVHRIGRTGRAGAKGTAYTYFTAANARFAKELIAILEEAGQKVSPELAAMG
RGAPPPPSGPRGFQDRGRGYGSSRPWS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacgacagccgctccggcgacccaacttcctatcgtgaccggaggagcgat
tctgggctaggtgcacctacagggtttggtggttctgtacaacactcttcatcaaacagg
agggattatgatgatggtgggtcaccaaagaggaacctcagtttggatggtttacctcat
tttgagaaaaacttctacgttgagtcaccagctgtaagggcaatgacagatgctgaagtt
aatgagtaccggcagcagagggaaataactgttgaaggtcgagatatcccgaaacctgtc
aagtcctttcatgatgctggttttccagaatatgtaatggaagaaattacaaaagctggc
tttactgaacctacgcccattcaatctcaaggttggcccatggctttgaaggggcgtgat
ctgataggaattgcagaaacaggatcagggaagacacttgcttacttgttgccatccatt
gtgcatgttaatgctcagcctattctaaatcctggagatggaccaattgtgttagttttg
gctccaactcgtgaacttgctgtccaaatacaacaagaggctactaaatttggtgcatca
tctaggattaagagtacatgcatctatggtggggttccaaagggacctcaggtgcgtgat
ctccagaaaggtgtcgaaattgtaattgccactccaggaaggttaattgatatgcttgag
tcaaatcataccaacttgcagagggtcacataccttgtattggatgaagctgataggatg
ttggatatggggtttgatcctcagctacggaagattgtctcccagattcgtccagatcgt
caaactttgtattggagtgctacctggccaaaggaggtcgaacaattggcaaggaagttc
ctttataacccatacaaagtaattataggctcttctgatttaaaagctaaccatgcaata
cggcaatatgttgacattgtttcggaaaagcagaaatatgataaattggtaaagttgcta
gaggacatcatggatggcagccgaatactgatatttatggataccaaaaaaggatgtgat
caaatcactaggcaactccgcatggatggatggcctgcactctcaattcatggagataaa
agtcaagcagaaagagattgggtgctctcagaatttaaatcaggcaaaagtcctattatg
acggcaacagatgttgcagcccgtggtctagatgtgaaggatgtgaaatatgtaataaat
tatgacttcccggggtcacttgaggattatgttcatcgcattgggcggacagggagagct
ggtgcaaaaggaactgcatacacatacttcacagctgctaatgccagatttgcaaaggaa
cttatagccatactcgaggaagctggacagaaagtgagtcctgaattagcagcaatgggg
cgtggtgcacctcctccaccttcaggtccccgaggtttccaagaccgtgggaggggttat
ggcagttctcgtccatggagctga
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