Glycine soja (wild soybean): 114422372
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Entry
114422372 CDS
T06057
Name
(RefSeq) nuclear poly(A) polymerase 4-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114422372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114422372
Enzymes [BR:
gsj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
114422372
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
114422372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
114422372
NCBI-ProteinID:
XP_028244490
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Position
8:16293300..16298545
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AA seq
704 aa
AA seq
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MGGSEGVGASSKQFGVTKPISMAGPTVTDLQRTRELEKFLAVSGLYESKEEAAKREEVLH
RLGEIVKNWVKQLTRLRGYTDQMVEDANAVILTFGSYRLGVHGPGADLDTLCIGPSYVNR
EEDFFYTLHDILANIEEVTELQPIPDAHVPVMKFKFDGISIDLLYASISRLIVPEDLDIS
DVSVLHNVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGIYSNVTGFLG
GVNLALLVARVCQFYPKAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENDLGFPVWHPGKN
PRDRSHHMPIITPAYPCMNSSYNVSMSTLRVMMEQFQYGNKICGEIELSKDCWKALFEKY
SFFESYKNYLQVDVVAADADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDT
SRQCAHCAFFMGLHRKEGEVVQEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVRRR
QIPCYVFPDGYKRSRPSRPTSQFENCKSFHNNEVSVTEHVERIRKRKNNDGVDVREDAIV
KRQYACPPGDRLARRNSLGTGGLSVEAVSDSQELRSVECNHLSNSGQDDLDRTESPEAAS
NSSVITSVGSSEDIVSVSVAGCVENSRGVEMMNNGRFEDTTYGNDSVTLVKNIVASGNEV
FQHELQQQLQPNAMLGMVLDSAEKVLSEAVQEPVIRRLSLPSTV
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggggggctcggaaggggtgggagcatcgtcgaagcaattcggtgtcacgaagcccata
tcaatggctggcccaacggttactgatttgcagaggactcgtgagttagagaagtttctc
gctgtttcggggctttacgagagcaaggaggaagctgccaaaagggaagaggttcttcac
cgacttggagagatagtgaaaaattgggtgaagcaacttacccgccttaggggatacact
gatcaaatggtggaagatgcaaatgctgtcattttgacttttggttcttatcggcttggt
gttcatggtcctggggctgatttagacactttatgcattgggccgtcctatgtaaaccgg
gaggaggattttttctacacattgcatgatatcttagctaacatcgaggaagtcacagaa
ctgcaaccaattccggatgctcatgtcccagttatgaaattcaagtttgatggaatatca
attgatctcctctatgccagtatttctcgattgattgtacctgaagacttggatatatct
gatgtctctgttctacacaatgttgatgagcctaccgtgcgaagtttgaatggctgtagg
gttgcagatcaaattctaaagcttgttcctaatgttgagcactttcgcacaacacttcgt
tgcttgaaattttgggccaaaaggcgaggcatttattctaatgtgacaggttttcttggt
ggtgttaacttggcacttcttgtagctcgagtgtgccagttttatccaaaagcagttcca
agtatgcttgtttctagattcttcagggtatatacacagtggcggtggccaactcctgtc
atgttatgtccaatagaggagaatgatcttgggtttcctgtttggcatcctggtaaaaat
cctcgtgacagatcccatcatatgccaatcattacccctgcctatccctgtatgaattct
agttataatgtttctatgagcacacttcgtgtgatgatggagcagttccaatatggcaat
aaaatctgtggggaaatagaattgagtaaagattgttggaaggctctgtttgaaaagtat
agtttctttgaaagctataaaaactacttgcaagttgatgtagttgctgctgatgccgat
gacttgcgcagctggaaaggttgggtggaatcacgccttcgccagctgactttgatgatt
gaacgtgatacttttgggaagttgcaatgtcatccctatcatcatgagtttgtcgatact
tcaaggcagtgtgcccattgtgctttctttatgggtttgcataggaaagagggagaagtt
gttcaagaaggccagcaatttgatatacgagggacagttgaagaatttcggcattctgtt
aatatgtacatgttctggaaaccagggatggagatttatgtttctcatgttcgtagaagg
caaattccatgctatgtgtttcctgatggttataaacgatctcggccatcaaggccaaca
tcacaatttgagaattgtaaatcatttcataataatgaggtttctgtgactgaacatgtg
gagagaatccgtaagaggaagaacaatgatggtgtggatgtgagggaggatgctatagtt
aaaaggcaatatgcttgtcctcctggggatagattggcaagacgcaacagccttggtact
ggtggtttgtctgttgaagctgtatctgatagtcaagagttgagaagtgtggagtgcaat
catttgtcaaacagtgggcaagatgatttggatagaacagagtctcctgaagctgcttca
aattctagtgtgattacatctgttggttcttctgaagatattgtatctgtgtcagtggct
ggttgtgttgagaactccaggggtgttgaaatgatgaacaatggaaggtttgaggatact
acttatgggaatgattctgtcacactggtgaaaaatatagtggccagtggaaatgaagtg
tttcagcatgagctacagcagcagttgcagccgaatgcaatgctagggatggttcttgat
tctgcagaaaaggttctctcagaagctgtgcaagagccggtgataaggagattgagtcta
ccatcgacagtttag
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