Geomonas subterranea: KP001_01905
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Entry
KP001_01905 CDS
T07936
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
gsub
Geomonas subterranea
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
PAS_9
PAS
PAS_4
AAA_5
AAA_2
PAS_8
AAA
Mg_chelatase
AAA_16
PAS_7
DUF815
HTH_23
IstB_IS21
AAA_3
HTH_50
HTH_29
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QXE91320
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Position
438352..440133
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AA seq
593 aa
AA seq
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MEQPTEIAGPAAVKAADDGNSSGILHLDAQLCIVSLDEAAGTLLGAAPQALLGRRLDEIA
DLADLGAYMKSGTVFNGQPIEVSGRRILCDYLPTVESDQVVGGVLSLLRVLPDALDCHVD
LKELLQSAGAYLDLNYDGIVICDRAGIIVMVNQAFADLLDTTPHAIIGKHLNEAYLNSQP
SRLPGVMETETPQVGITHYINGKQVYASLYPIQKDGKVVGGIGKILFKDIREITLIANRL
QTAPETRALAGSVTRKETSSRYDVNSIVGQSKKILDLKESLLRVAGKNSNVLLLGESGTG
KELFAHAIHAASNRRYAQFVKVNCAAIPEHLLESELFGYSEGAFTGARKGGQLGKFEQAH
LGTIFLDEIGDMPLYMQAKMLRVLQERELTPLGGGAPKMVDVRVVAATNCNLEHLVREGK
FRQDLYYRLKVVTLAIPSLRERREDIRPLVMSFIHQFNEEFGLEVQALSLEAREVIMRYD
WPGNVRELRNVIESAFNLVTGPLILRDHLPEQLSRMHDSSAAEASAAQDIGGYIHQRLGA
KPLSEIVDEFEQLLLETALEVSKGNKLQAADLLGISRQWLYKKLHKYESGEDP
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcccacagaaatagccggaccggcagcagtgaaggcagcggatgacgggaac
tcttcgggaatcctgcatctcgatgcccaactctgcatcgtctcgctggacgaggccgcc
ggtactcttcttggggcggcgccgcaagcgcttctggggcggaggctggacgagatcgcc
gatctggctgatctgggagcctatatgaagagcggcaccgtcttcaacgggcaaccgatt
gaggtcagcggccgccggatcctgtgcgactacctccctaccgtggaatcggaccaggtc
gtcggaggcgtgctctcgctgctgcgggtccttcccgacgccctcgactgccacgtcgat
ctgaaggaattgctacagtcggccggcgcctacctcgacctcaactatgacggtatcgtt
atctgcgaccgcgccggcatcatcgtcatggtcaaccaggccttcgccgatctcctcgac
accaccccccacgccatcatcggcaagcacctgaacgaagcctacctcaactcgcaaccc
tcgcgccttcccggcgtgatggaaaccgagactccccaagtcggcatcacccactacatc
aacgggaaacaggtgtacgcctcgctctacccgatccagaaggacgggaaggtggtgggg
gggatcgggaagatcctcttcaaggacatccgcgagatcaccctgatcgcgaaccggctg
cagacagcccccgagacgcgggccctggccgggagcgtgaccagaaaagaaaccagttcg
cgctacgacgtgaacagcatcgtcgggcagagcaagaagatcctcgatctgaaggaatcc
ctgctgcgcgtggcgggaaagaattccaacgtcctgttgctgggggaaagcggcacaggc
aaggaacttttcgcgcatgccatccatgccgccagcaaccggcgctacgcgcagttcgtc
aaggtgaactgcgccgccatcccggagcacctcctcgaatcggaactgttcggctactcc
gagggggccttcaccggggcgcgcaagggtgggcagctggggaaattcgagcaggcgcac
ctggggaccatcttcctcgacgaaatcggcgacatgccgctgtacatgcaggcgaagatg
ctgcgtgtcctgcaggagcgggaacttaccccgcttggggggggcgctccgaagatggtc
gacgtcagggtggtcgccgcgaccaactgcaacctggagcacctggttcgggagggaaag
ttcaggcaggacctgtactaccgcctgaaggtggtgacgctggccatcccttccctgcgg
gagcgcagggaggacattcggcccttggtcatgagcttcatccaccagttcaacgaggag
ttcggcctggaggtgcaggcgctgagcctcgaggcgagggaagtcatcatgcgctatgac
tggcccggcaacgtccgggagctgcgcaacgtcatcgaaagcgcgttcaacctggtgacc
gggcctctcatcctgcgcgatcatcttcccgaacagttgtcccggatgcacgactcttcg
gctgccgaggcatcagccgcacaggacatcggcgggtacattcaccagcgcttgggggcc
aagcccctgtccgagatagtggacgagttcgaacaactcctgctggaaacggccctggag
gtgagcaaggggaacaagcttcaggccgcagacctcctgggcatttcccggcagtggctc
tacaagaaactgcataaatacgaatccggcgaagatccctga
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