Geomonas subterranea: KP001_06620
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Entry
KP001_06620 CDS
T07936
Name
(GenBank) dipeptide ABC transporter ATP-binding protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
gsub
Geomonas subterranea
Pathway
gsub02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KP001_06620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsub02000
]
KP001_06620
Transporters [BR:
gsub02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
KP001_06620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_13
PRK
Mg_chelatase
HTH_31
AAA_22
RsgA_GTPase
Zeta_toxin
AAA_16
AAA_5
Rad17
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QXE92189
LinkDB
All DBs
Position
1539335..1540321
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AA seq
328 aa
AA seq
DB search
MTPLLTAENLVKQYPVRGGMFAEKRILTAVAGIDLELHPGETLGLAGESGCGKSTVARLL
TGLTPPTSGSIRYAGRELAAMSKAELAQYRKEVQMVFQDPFSSLNPRMRVAEIVGEPLEI
HGIGDAAGRRGKVAELLGRVGLSPGHMMRFPHEFSGGQRQRIGIARALAVSPKLIIADEP
VSALDLSIQAQIINLLQDVKKDLGLSFLFITHDLSVLRHLSDRVAIMYLGRIVETGRRDQ
VLNRPLHPYTEALLSAIPSIDPKRRTRHVIAKGELPSPVSPPAGCPFHPRCPYAQPVCSE
KRPELLEKVPGQRAACHFSEEIFLAKEK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgcttctgaccgccgaaaacctggtgaagcagtaccccgtgcgcggcgggatg
ttcgccgagaagcggatactcaccgcagtggccggcatagacctcgagctccaccccggg
gagacgctggggctcgccggcgaatccggctgtggcaagtcgaccgtggcgcggcttctc
accgggctcacccctcccacctcgggaagcatccgctacgccgggcgcgagctggcggcg
atgagcaaggcggaactcgcccagtaccgcaaagaggtgcagatggtgttccaggacccg
ttctcctcgctgaacccgcgcatgcgggtcgcggagatcgtgggggagccgctggagatc
cacggcatcggggacgcggccggacggcggggcaaggtcgcggaactgctcgggagggtc
ggcctctcccccgggcacatgatgcgctttccccacgagttctcgggtgggcagcgccag
aggatagggatcgcgcgcgcactggccgtctcgccgaagctgatcatcgccgacgagccg
gtctcggccctggacctctccatccaggcccagatcatcaacctgctgcaggacgtgaaa
aaggacctggggctctcctttttgttcatcacccacgacctctcggtgctcaggcacctg
agcgaccgggtggcgatcatgtacctgggaaggatcgtggagacggggagacgggaccag
gtgctgaaccgcccgctgcacccctacaccgaggcgctcctctcggcgataccgagcatc
gatccgaagagaaggacccggcacgtgatcgccaaaggggaactcccctcgcccgtttca
ccccctgccggctgcccgttccacccccgctgcccctacgcgcagccggtgtgcagcgag
aagcgccccgaactgctggaaaaagttccgggacaacgggcagcctgccacttcagcgag
gaaatcttcctcgccaaagaaaagtaa
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