Geobacillus thermoleovorans CCB_US3_UF5: GTCCBUS3UF5_1130
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Entry
GTCCBUS3UF5_1130 CDS
T01676
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
gte
Geobacillus thermoleovorans CCB_US3_UF5
Pathway
gte03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gte00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GTCCBUS3UF5_1130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gte03021
]
GTCCBUS3UF5_1130
03400 DNA repair and recombination proteins [BR:
gte03400
]
GTCCBUS3UF5_1130
Enzymes [BR:
gte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GTCCBUS3UF5_1130
Transcription machinery [BR:
gte03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GTCCBUS3UF5_1130
DNA repair and recombination proteins [BR:
gte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GTCCBUS3UF5_1130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AEV17442
UniProt:
G8N0Z7
LinkDB
All DBs
Position
116398..119970
Genome browser
AA seq
1190 aa
AA seq
DB search
MTGRLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFREISPIEDFSG
NLSLEFIDYSLGEPKYTVEEAKERDVTYAAPLRVKVRLINKETGEVKEQDVFMGDFPLMT
ETGTFIINGAERVIVSQLVRSPSVYYSDKVDKNGKRGYSATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFSSDQEIIDLLGDNEYLRNTLEKDNTDSTEKALIEIYERL
RPGEPPTLENAKNLLASRFFDPKRYDLASVGRYKINKKLHIKNRLFNQRLAETIIDPETK
EVIAEAGAMIDRRTLNRLLPYLEKGVGLQTYRPAEGVVDGDISVQTIKIYAPNDPDGEKV
INVIGNGFIAEDVKHITPADIIASISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIAAIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSTYAKVNKF
GFIETPYRRVDPETGRVTDQIDYLTADEEDNYVVAQANVPLAEDGTFLEENVVARFRGEN
IVVKRDRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLLEPEAPIVGT
GMEYVSAKDSGAAVICKHRGIVERVEAKEIWVRRLIEVDGKEVKGDLDKYRLLKFVRSNQ
GTCYNQRPIVKKGDIVEKGEILADGPSMDKGELALGRNVLVAFMTWDGYNYEDAIIMSER
LVKEDVYTSIHIEEYEAESRDTKLGPEEITRDIPNVGEDALKNLDERGIVRIGAEVKDGD
LLVGKVTPKGMTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKVFNREDGDE
LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISRILPEEDMPFLPDGTPIDIMLNPL
GVPSRMNIGQVFELHLGMAAKKLGLHIASPVFDGATEEDVWNILEEAGLARDAKTVLYDG
RTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENIPEPGVPESFKVLIKELQSLGM
DVTILTSDEQEVNMENFDDDDDHAPDAIMVDVKPAEREEAGEEKDAVTKE
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggccgactagttcaatacgggcgacaccgccaacgcagaagctatgcacgcatc
agcgaagtgctggaattgccgaacttgatcgaaattcaaacgtcctcctaccaatggttt
ctcgatgaagggctgcgggaaatgtttagggaaatttccccgattgaagacttttccggc
aatctctcgcttgaatttatcgactatagtttaggagaaccgaaatatacggtcgaagag
gcgaaagaacgcgacgttacatatgcggcgccgcttcgcgtcaaagttcgcttgattaat
aaagaaacgggcgaagtgaaagaacaagacgtgtttatgggcgattttccgctcatgacg
gaaaccggaacgtttattatcaatggggcggaacgcgtcattgtttcccagctcgtccgt
tcgccaagcgtctattacagcgacaaagttgataaaaacggcaaacgcggctactcggcg
acagtgattccgaaccgcggcgcatggcttgaatatgaaaccgatgcgaaagacgtcgtt
tacgttcgcatcgaccgcacccgtaaactgcccgttacggtgcttctccgtgcgcttggg
ttcagctccgaccaagaaatcatcgatctgctcggcgacaacgaatacttgcgcaatacg
cttgaaaaagataataccgacagcacggaaaaagcgttgattgaaatttacgagcgtctt
cgtccgggagagccgccgacgcttgagaatgcgaaaaatttgctggcgtcgcgctttttt
gatccgaagcgctatgacttggcgagcgtaggccgttataaaatcaataaaaaacttcat
attaaaaaccgcctgttcaatcagcggctcgcggaaacgatcattgatcccgaaaccaag
gaagtcatcgccgaagctggagcgatgatcgaccgccgaacgctgaatcgcctgctcccg
tatttggaaaaaggggtcggcttacagacataccgcccggccgaaggggtggtggacggg
gacatttcggtgcaaacgatcaaaatttatgccccgaatgacccggatggcgaaaaagtg
atcaacgtcatcggcaacggcttcatcgccgaggatgtcaaacatattacaccggctgac
atcattgcgtcgatcagctatttcttcaacttgctccacggcgtcggcgatacggatgac
atcgaccatttaggcaaccgccgcctccgttcggtcggcgaactattgcaaaaccaattc
cgcatcggcctgtcgcgcatggagcgcgtcgtgcgcgagcgcatgtcgatccaagatacg
aacacgattacgccgcagcagctgatcaacatccgcccagtgatcgcggcgatcaaagag
tttttcggcagctcgcagctgtcacagttcatggatcaaacgaacccattggccgaactg
acgcacaagcggcgtctgtccgcgcttggccctggcggattgacacgtgagcgcgctggg
tttgaggtgcgcgacgttcactattcgcactacgggcggatgtgtccgattgaaacgccg
gaaggtccgaacatcggactcatcaactcgctgtccacttacgcgaaagtgaacaagttc
ggctttattgaaacgccataccggcgcgtcgatccggaaacagggcgggtgacggaccaa
atcgattatttgacagccgatgaagaggacaattacgttgtagcgcaggcgaacgtaccg
cttgcggaggacggcacgttccttgaagaaaacgttgtcgcccgtttccgcggcgagaac
atcgtcgtcaagcgcgatcgcgtcgactacatggacgtttcgccgaagcaagtcgtctcg
gcagcgacggcgtgcatcccatttttggaaaacgacgactcgaaccgcgcgctgatggga
gcgaacatgcagcggcaagccgtgccgctgttggaacccgaagcgccgatcgttggcacg
gggatggagtatgtttcggcgaaagactcgggcgcagcggtcatttgcaagcaccgcggc
atcgtcgagcgcgtcgaagcaaaggaaatttgggtgcgtcggctgattgaagtggacggc
aaagaagtcaagggtgatctagataaatatcggttgctgaaattcgttcgttcgaaccaa
ggcacgtgctacaaccagcggccgatcgtgaaaaaaggcgatatcgttgagaagggcgaa
attttggccgatggcccgtcgatggataagggcgaattggcgcttggccgcaatgtgctt
gtcgcttttatgacatgggacggttacaactacgaagacgcgatcatcatgagcgaacgg
ctcgtcaaagaagacgtgtatacatcaattcatattgaagagtatgaagccgaatcgcgc
gatacgaaactcggtccggaagaaattacgcgcgacattccaaacgtcggcgaggatgcg
ctgaaaaacttggatgaacgcggcatcgtccgcatcggcgcagaagtcaaagacggcgac
ttgctcgtcggcaaagtgacgccaaaaggaatgaccgagttgacggcggaagagcggctt
ttgcacgcgatcttcggcgaaaaagcgcgcgaggtgcgtgatacgtcgttgcgcgtcccg
cacggcggcggcggcatcgtccttgacgtgaaagtgttcaaccgcgaagacggcgacgag
cttccgccgggtgtcaatcaactagtgcgcgtctatattgtgcaaaagcggaaaatttcc
gagggcgacaaaatggcaggccgccacggaaacaaaggggttatttcccgcattttgccg
gaggaagatatgcccttcttgccggatggcacgccgattgacatcatgttaaacccactc
ggcgttccgtcgcggatgaacatcgggcaagtatttgagctgcaccttggcatggcggcg
aaaaaactcggcctgcacatcgcctccccggtctttgacggggcgacggaggaagacgtt
tggaacatcctcgaagaggcaggtctagcgcgcgatgcaaaaacggtgctgtatgacgga
cggacgggtgaaccgtttgataaccgcgtgtcggttgggatcatgtacatgatcaagctc
gcccacatggtcgacgacaagcttcatgcccgttccaccggcccgtactcactcgtcact
caacagccgctcggcggcaaggcgcagttcggcggccagcgctttggtgagatggaagta
tgggcgcttgaggcgtatggggcggcatacacgctgcaagaaattttgaccgtcaagtcc
gacgatgtcgtcggccgtgtcaaaacgtacgaggcgatcgtcaaaggagaaaacattccg
gagccgggtgtgccggagtcgtttaaagtgttgatcaaagagctgcaaagcttgggcatg
gacgtcacgattttgacgagcgatgaacaagaagtgaacatggaaaactttgatgatgat
gatgaccatgcaccggatgccatcatggtggacgtcaaaccggccgaacgggaagaagcc
ggcgaagagaaagatgcggtgacgaaagaataa
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