Parageobacillus thermoglucosidasius C56-YS93: Geoth_1303
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Entry
Geoth_1303 CDS
T01531
Name
(GenBank) PAS modulated sigma54 specific transcriptional regulator, Fis family
Organism
gth
Parageobacillus thermoglucosidasius C56-YS93
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS
PAS_9
Sigma54_activ_2
PAS_4
HTH_8
PAS_8
AAA_2
AAA
AAA_5
PAS_10
Mg_chelatase
HTH_50
AAA_3
NAD_binding_7
NAD_binding_3
Semialdhyde_dh
HcgC
CoA_binding
AAA_16
bpMoxR
GFO_IDH_MocA
DUF815
PAS_6
PglD_N
Motif
Other DBs
NCBI-ProteinID:
AEH47295
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Position
1244228..1246294
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AA seq
688 aa
AA seq
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MKKVLIVGAGNGGTALLKLLDKTAMFQIIAVADIDENAPGIKVAKEKNIPTGTDWRAFIN
EELDLIIEATGKQGVLEEIRKRCAANTIVVPGTVAQMMAELVKEKEMLIAKLKSETARRD
LILNSAHDGMIVVDEFACITDINNSAAEMMEVDKEEVIGKHILEVIPASGLPRVLATKQT
EVHQELKLENGKKIITTRIPMMDETGKLIGALAVFKDVTELVKLAEEITDLKEMRMMLEA
IIHSSEEAISVVDEHGNGIFINPAYTRLTGLSEEEVIGKPATADIAEGESVHMQVLKTRR
PIRGVRMKVGPKKRDVVVNVAPIIVDGVLKGSVGVIHDVSEIQRLTNELNRARHIIRTLE
AKYSFADIIGTSEEITVAIEQAKLAAKTPATILLRGESGTGKELFAHAIHNASDRKYNKF
IRVNCAAISETLLESELFGYEEGAFSGAKRGGKRGLFEEANNGSIFLDEIGELSANTQAK
LLRVLQEGEIVRVGGTKPIPINVRVIAATNVNLEKAIAEGTFREDLYYRLNRMPIYIPPL
RARKEDIPALCQHLIQKLNQDYGRNVEGVTPAALDYLLSYDWPGNVRELENILGRAMIFM
KFNEVVIDVHHIPPLDISREAPSLHKYEKELEIRPLHEMMEQYEAEIIEQALRKYNNNKT
AAARALGISIRNLYYKLEKYGIDKKSTQ
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtattgattgttggcgctggaaatggaggaacggcgttattaaagctattg
gataaaacagccatgtttcaaattatcgccgtggcggatattgatgaaaatgctcccggc
ataaaagtggcgaaagaaaaaaacattccaaccggaacggactggcgtgctttcataaac
gaagaattggaccttattattgaagcaacgggaaagcaaggagtgctggaggagatccgc
aaacgatgtgccgcaaatacgatcgtcgttccgggaacagttgcgcagatgatggccgag
cttgtcaaagaaaaagaaatgctgattgcgaaactgaaaagcgaaacagcgcggcgcgac
ttaattttgaattctgcgcatgacggcatgattgtcgttgatgaatttgcctgcattaca
gatattaataatagcgccgcggaaatgatggaagtggataaagaggaagtcatcggaaaa
catattttagaagttattccggcaagcggattgccacgagtgttagcaacgaaacaaacc
gaagttcatcaagaattaaaattagaaaatggcaaaaaaattattacaacacggattcca
atgatggatgaaacaggaaagctgatcggcgcgctagctgtttttaaagatgttacagaa
cttgtgaagttagcggaagaaattacggatttaaaagaaatgcgcatgatgcttgaggcg
attatccattcttcggaagaagcgatttcggttgttgatgagcatggcaatggcattttc
atcaatcccgcttatacgcgcctcaccggtctgtcggaagaagaagtcatcggcaaaccg
gcaactgctgatatcgctgaaggagaaagcgtgcatatgcaggtgctgaagacgcgccgg
cccattcgcggcgtgcgcatgaaagttggcccgaaaaaacgcgatgtggtggtgaatgtg
gcgccaatcatcgttgacggcgtattaaaaggaagcgtcggcgtaattcatgatgtttcg
gaaatccaacggctcaccaatgaattgaatcgggccagacacattatccgcacgctggag
gcgaaatattcatttgccgatattattgggacgtcggaggaaataacggtagcgatcgag
caagcaaaattggcggcaaaaacgccggcaacgattttgcttcgcggcgaatctggcaca
gggaaagaattgtttgcccatgcgattcataacgcgagtgaccggaaatataacaaattt
atccgcgtgaattgtgcagccatttctgaaactctactagaaagcgaattatttggttac
gaagaaggagcgttttctggggcgaaaaggggaggaaagcgagggttatttgaagaagca
aataatggaagtattttccttgatgaaattggcgaactttccgccaatacgcaggcaaag
ctgcttcgtgtgctgcaagaaggggaaatcgtccgcgtcggcggcacaaagccgattccc
attaacgtccgcgttattgcggcgacaaatgttaacttagaaaaagcgattgcggaagga
acgtttcgtgaagacttatactaccggttaaaccgtatgccgatttatattcctccgttg
cgggcgagaaaagaggatatccccgccctgtgccagcatttaattcaaaagcttaaccaa
gattacgggcgcaatgtcgaaggggtgacgccggctgcgcttgattatttattgtcttac
gattggccgggaaatgtccgcgaattagaaaatatattgggacgagcgatgatttttatg
aagtttaacgaagtggtgatcgatgttcatcatattccgccgctggatatttcgagagaa
gctccatctcttcataaatatgagaaggagctggaaatccgccctcttcacgagatgatg
gagcaatacgaagcggaaatcatcgaacaagcgctgcggaaatataacaacaacaaaacg
gcggcggcacgtgcgctcggtatttcgattcgcaatttgtattacaagctggagaaatac
ggaattgacaaaaaaagcacgcaataa
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