Gluconobacter thailandicus: FXF46_04515
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Entry
FXF46_04515 CDS
T06199
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
gti
Gluconobacter thailandicus
Brite
KEGG Orthology (KO) [BR:
gti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gti03019
]
FXF46_04515 (hrpB)
Enzymes [BR:
gti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FXF46_04515 (hrpB)
Messenger RNA biogenesis [BR:
gti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FXF46_04515 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
ResIII
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QEH95613
UniProt:
A0A5C0A5P9
LinkDB
All DBs
Position
complement(954251..956698)
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AA seq
815 aa
AA seq
DB search
MLPELLSVLEQQPNAVLVAPPGAGKTTLTPLALLDVPWLAGQKIILVEPRRVAVRGAASR
MASTLGERPGETVGFRTRTDFAVSSRTRIEVVTEGLLVRRLLADPTLDGVGAVLFDEVHE
RSLDLDAALAFCLDLQRELRPDLRILAMSATPDGRAFTTLMNAPLIESEGRQYPIDVRHT
RDIPHPRDLPEACARAIRQAWSEEEGDILAFLPGVGEIRRTLALLGESVPVFPLHGEQTT
EDQDRAIAPSSVRRVVLATSIAETSVTVSGVRIVVDGGLRRAPCLDPNTGLSRLETLKIS
RATATQRAGRAGRQSPGIAIRLWSEATQRALRPQDAPEILVADLTDFALVTAAWQDVMGT
SPDALPLLDAPPAGVLKGGRELLRELGGIDAAGHITSLGKRMAGLGTHPRLAAMLCAAKT
IPERVTGACLAALLEERDPLRPRPNTPAGASAGADIRTRLALFERDDPRADRASLFHMRQ
SAKRFLRRMGGKDLPLSPMPSHAGPLLAAGFPDRVAQAAGELGRFRLAGGGSARVSANDG
LAREKLLAAAAFHTRTSTEITLAAPLDAENLPQTLLDRTTEQVETSLDGASGRIIARRRL
RLGALILRDRNTEVTPEEAQALLLQQIQSDLARALDWSDAIQQFQARVAHARATYAPHLP
DLSVEALAQSLEWLEPYLAGCDRLTQVKALDLLSILRAQLDYADLSALDRKLPPRLTLKA
STHDIDYTGAIPTVSARAQAFYGTATTPVLADGQVALQCALLSPAGRPQAITADLAGFWK
GSWSDMRKDMRGRYPQHDWPEDPATAEPPKPRPKR
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
attcttccagagcttctgagcgtacttgaacagcagcccaacgctgttctggtggctccc
ccgggcgcaggtaagacgacgctgacgccattggcgctgcttgatgtcccatggcttgcc
gggcagaaaattattcttgtcgaaccgcgccgtgttgccgtgcgcggtgccgcatcccgg
atggccagcacgctcggtgaacgtcccggcgagactgttggctttcgaacccgcacggat
tttgctgtttccagcagaacgcgcatcgaagtcgtgacggaagggttgcttgttcgccga
ctgctggcagacccaacgcttgatggcgttggtgctgtcctgttcgatgaagttcatgaa
cggtcgctggatctggatgcagcgttagccttctgcctggatcttcaacgcgaactgcgg
ccagatcttcgtattctggcgatgtccgcaacgccggatggtcgcgcttttacaacactg
atgaatgccccacttatagagagcgaagggcggcagtatccgattgatgttcggcacacc
cgtgacatcccgcatccacgagatctgccggaggcctgcgcccgagccatccgacaggcc
tggtcggaagaagaaggcgatattctcgccttcctgccgggtgttggtgagattcgccgg
acgctggcgctgcttggggagtctgtgcctgttttcccacttcacggcgagcagacaacg
gaagatcaggaccgtgccattgcgccatccagcgtccgtcgcgtcgtgctggcaacatcc
attgcggaaacatctgtgacggtttcgggcgtcaggattgtcgtggatggtggccttcga
cgggcgccctgtctggacccgaacaccggactgtcccggctcgaaaccctgaaaatctcc
cgcgcgacagcaacccagcgggccgggcgtgcaggccgacagtcgcccggtatcgcgatc
cggctctggtctgaagccacgcagcgtgccctccgcccgcaggatgcgcctgaaatcctt
gtcgcagacctcacggattttgcccttgtgaccgctgcctggcaggacgttatgggaacg
tcccccgatgctctgcctcttttggatgcaccgcctgccggggttctgaagggtggccgc
gaactgctccgtgagctcgggggcatcgacgccgcagggcacatcacatccctcggaaaa
cggatggccggattgggaacccatccgcgccttgccgcgatgctctgtgcggcaaagacg
attccggaacgtgttaccggcgcctgccttgccgcgcttctggaagagcgcgatccgctt
cgcccaagaccgaacacacctgcaggtgcttcggctggagcggacatccgcacgcgtctg
gctcttttcgaacgcgatgacccccgtgccgatcgcgccagcctgtttcacatgcgtcag
tccgccaagcgcttcttgcgccggatgggcgggaaagatctgcccctcagcccgatgcct
tcgcacgctggaccgttgttggctgccggtttcccagaccgtgtggcgcaggccgctggc
gaactggggcgctttcgcctcgctggcggaggaagcgctcgggtctcggccaatgatggt
ctggcacgggaaaagctgctggctgccgctgccttccacacccggacgtccacggaaatc
acgcttgccgcgcctctggatgcagaaaacctcccccaaaccttgttggaccggactact
gaacaggtggaaaccagtctggatggggcttctggacgcatcatcgccagacgcagactt
cgtctgggcgcgttgatcctgcgagaccgcaatacggaagtaacgcctgaggaagcacag
gcgctcctgcttcagcagatccagtccgatctggcgcgagccctcgactggtccgacgcg
atccagcagtttcaggcgcgcgtcgcccatgcccgggcaacctatgcaccacatttgccg
gatctgtccgtggaggctctggctcaaagtctggaatggctcgaaccctatctggcgggg
tgtgaccgcctgacgcaggtcaaggcgttggatcttctgtccattctgcgtgcgcaactg
gactacgctgatctgtcagcgttggatcgaaaattaccgccccgtttgacgctgaaagcc
agcacccacgatattgattacaccggcgcgattccaacagtctccgctcgtgcgcaggct
ttctacggaacagccacaacgcctgtgcttgctgatggtcaggtcgcgcttcaatgtgcg
cttctgtcgccagctggtcgcccgcaggcgatcacggccgatctggcaggcttctggaaa
ggaagctggtccgatatgcgcaaagacatgcgcggccgttatcctcaacatgactggccg
gaagatccggcgactgctgagccaccgaagcccaggccaaagcgttag
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