Geobacillus thermoleovorans KCTC 3570: GT3570_03280
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Entry
GT3570_03280 CDS
T04710
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
gtk
Geobacillus thermoleovorans KCTC 3570
Brite
KEGG Orthology (KO) [BR:
gtk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtk03400
]
GT3570_03280
Enzymes [BR:
gtk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GT3570_03280
DNA repair and recombination proteins [BR:
gtk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GT3570_03280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_30
ResIII
AAA_12
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AMV09968
LinkDB
All DBs
Position
626706..630434
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AA seq
1242 aa
AA seq
DB search
MNATIRPKPAGSRWTDEQWKAIAAGGRDILVAAAAGSGKTAVLVERIIQKVTAEEGAVDI
DRLLVVTFTNAAAAEMKARIGEALERELAKRPHSLHLRRQLSLLPRAAISTLHSFCLDVI
RKYYYLLDLDPSFRIADETEIELLKEDVLEELLEEEYGKPDNERFFAVVDAYTGDRSDAE
LQEMIVALYEFSRSHPEPDEWLAGLTSMYDVDERTDIKTLPAARYIAQHAAMELAAARRL
IRRALELAEEPGGPRPYADRLREDRDMIADLETRLSGPWAELHRALKALSFGRLPACRGK
DYDERLIDEAKSLRDQAKKKVEALRDNVFSLDPSVWLRHMREMKPIVETIANLVRRFAVM
FQAAKREKGIVDFSDLEHYCLHILRRRDPETGEWQPSPAALEYQAQFDEVLVDEYQDTNL
VQEAILQLVKKGSERTGNLFMVGDVKQSIYRFRLAEPMLFLDKYKRFTADGEEGGMKIDL
ASNFRSRREVLDGTNFLFAQLMGETVGEMVYDEAAQLKYGADYPEGEDAAPEVMIINRQR
AAEEDEEEAAEWEAAELEARLMAKKIKEIVSAPFYVYDRPSGQPRRAMYRDIVILVRSMT
HAPQMIEQLQAQGIPAAADLSSGYFQATEISIMLSLLKVIDNPYQDIPLAAVLRSPLFRF
DENELAMIRLADPKGTFYEALCSFRQKPAETKEEANAQRKAAAFLERLEGWRTMARRRSL
ADLIWLLYRDTQFYDFVGALPGGRQRQANLRALYDRARQYESTSFRGLFRFLRFIERLQE
RGDDLGAARPLGEQEDVVRIMTIHSSKGLEFPIVFLAGLARSFHTRDLHHPYLLDKELGF
AARFVHPRLRISYPTLPLLAIQTKKRLELLAEEMRILYVALTRAKEKLYLLASVNDAAKE
IEKWKSAASERGWLLPDDVRASARSYLDWIGRALIRHRDGGALAGMKAPEEVASHPSVWR
VSIVPAADLRGAEAAREEMDGGVLFALEQGRPVPVEGGWRKEVKRRLLWRYSYEKETAVR
AKQSVSELKEHRVLFGEQADEWRPRQGTAPVFSRPRFMQEKTLTPAEKGTALHIVMRHLD
LQAPLDESSIRSQIVRLVEKELLSAEQAEVVDPAAIAAFFTADLGRRLCAAREVHREVPF
SLGLKAAELYGGEGTESGRRVLVQGVIDCVFVDECGYVMIDYKTDEVVHRFAGQKEEAAR
FLLGRYGTQMRLYRRAIEQIWRAPVAECYLYSFDGGFVVAVE
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccacgattcgcccgaagccggctgggagccgatggacggatgaacaatggaag
gcgatcgccgcgggcggccgagacattcttgtcgccgcggcggccggatccgggaaaacg
gccgttcttgtcgagcggatcattcaaaaagtgacggcggaagaaggagcggtcgatatc
gatcggctgcttgtcgttacctttaccaatgcggcagccgcggagatgaaagcaagaatc
ggcgaggcgctcgagcgggaattggccaagcgtccgcattcgctccatttgcgacgtcaa
ctcagcctgcttccccgcgccgcgatctcgacgctccattccttttgcttggatgtcatt
cgcaaatattactatttgcttgatttggatccgtcgtttcgcatcgcggatgaaacggaa
atcgagctgttgaaagaggatgtccttgaagagctgcttgaggaggaatatggaaagccg
gacaacgagcggtttttcgctgtcgtggatgcctatacgggcgaccggagcgatgcggag
ctgcaggagatgattgtcgccctttatgaattttcccgctcccatccggaaccagatgaa
tggttggccggtttgacctcgatgtatgatgtcgatgaacgaacagatataaagacgctg
ccagcagcccgctatatcgcgcaacatgctgcgatggagctggcggcggccagacggctg
atccgaagggcgcttgagcttgctgaagagccgggcggaccgcgtccgtacgcggatcgg
ctgcgcgaagatcgagatatgatcgctgatttggaaacgcgtctttctggaccgtgggcc
gagctgcatcgcgcgctaaaggcgctgtcgtttgggcggctgccggcctgccgcggcaag
gactatgacgagcggctgatcgacgaagccaaatcgttgcgtgatcaggcgaaaaagaaa
gtggaggcgctgcgcgacaatgtgttttcgctcgatccatccgtttggctccgccatatg
cgggaaatgaagccgatcgttgaaacgatcgctaaccttgtccgccgttttgccgtcatg
ttccaagcggcgaaacgggaaaaaggaatcgttgatttttctgacttggaacattattgt
ttgcatattttgcggcggcgcgatccggaaacgggcgaatggcagccttcccccgccgcc
ttggaataccaggcgcagtttgatgaagtgcttgttgacgagtatcaagatacgaacctc
gttcaagaagcgattttgcagctggtgaaaaaagggagcgaacgaacaggcaatttgttt
atggtcggcgacgtgaaacagtcgatttaccgattccgccttgccgagccgatgctgttt
ctggacaaatacaaacgattcaccgcagacggagaagaaggggggatgaaaatcgatctt
gcgagcaacttccgcagccgccgcgaagtgcttgacgggacgaattttctgtttgcgcaa
ctcatgggggaaaccgtcggcgaaatggtttacgacgaagcggcgcagttgaaatacggc
gctgattacccggaaggggaggatgcggcgccggaagtcatgatcatcaaccggcagcgt
gcggcggaagaggacgaagaggaagcggctgaatgggaagcggcggagctcgaggcgcgg
ctgatggcgaaaaaaatcaaagagatcgtttccgctccgttttatgtatacgatcgtccg
agcgggcagccgcggcgcgccatgtaccgtgacatcgtcatccttgtccgctcgatgacg
catgcgccgcagatgatcgagcagctgcaggcgcaaggcatcccggcggccgcggatttg
tcatccggctattttcaggcgacggaaatttcgatcatgctctcactgttaaaagtgatc
gacaacccgtaccaagacattccgctcgccgcggtgctccggtcgccgctctttcgtttt
gacgagaatgagctcgccatgattcgcctcgccgatccaaaaggcacgttttatgaagcg
ctctgttcgtttcggcaaaagccggcggaaacaaaagaggaggccaacgcccaaaggaaa
gcggcggcgttcttagagcggctcgagggctggcgtacgatggcgcgccgccgctcatta
gctgatctcatttggctgctgtaccgcgatacgcaattttacgattttgtcggcgcactg
ccgggcggcaggcaacggcaggcgaacttgcgcgctttgtacgaccgcgcgcggcagtac
gagtcgacgtcgtttcgcggcttgtttcgctttcttcgcttcatcgagcggctgcaagag
cgcggcgacgatttaggggcggcccggccgctcggcgagcaggaagacgtcgtgcgcatc
atgacgattcacagcagcaaaggattggaatttccgatcgtgtttctcgccgggcttgcg
cgttcgtttcatacgcgcgatttgcatcacccgtatttgcttgataaagagctgggtttt
gccgcccgctttgtccacccgcggctgcgcatcagttatcccacgctgccgctgttggcc
atccaaacgaaaaagcggcttgaactgctcgctgaggagatgcgcattttgtatgtcgcg
ctcacaagggcaaaagagaagctgtatttgttggcgtcggtcaacgatgcggccaaggag
attgaaaaatggaaaagcgctgcttcggaacgcggctggcttctccccgacgatgtgcgg
gcttcggcccgctcctacttggattggatcggccgggcgctcatccgtcatcgtgatggg
ggggcgcttgcgggaatgaaggcgcctgaagaggtcgcctcccacccgtctgtatggcgt
gtctccatcgtgccggccgccgatttgcgcggcgcagaggctgcgagggaggagatggat
ggcggcgtgctttttgccctcgaacaaggacgacccgttcccgtagaaggagggtggcgg
aaggaggtcaaacgccgcttgttgtggcggtattcgtatgagaaagaaacggccgtgcgc
gccaagcaatcggtgtcagaactgaaagaacatcgcgtgctctttggcgagcaagcggac
gaatggcggccgcgacaagggacggctccggtgttttctcgaccgcgtttcatgcaggag
aaaacattgacgccggccgaaaaagggacggcgctccatatcgtcatgcgccatcttgat
ttgcaggcgccgcttgatgaatcgtcgatccgcagtcagatcgtccgccttgtcgaaaaa
gagctgctgtcggcagaacaagcagaggtggtcgatccagcggccatcgctgcctttttc
actgcagatcttggccgccgcctttgcgccgcccgcgaagtgcaccgtgaagtgccgttc
agcttggggcttaaagcggctgaactgtacggcggagaagggacggaaagcggccggcgc
gtcctcgtgcaaggggtgatcgactgcgtgtttgtcgacgaatgcggctatgtgatgatt
gactataaaacggatgaagtcgtccaccgttttgctgggcaaaaggaagaagcggctcgt
tttctgctcggccgctacgggacgcaaatgcgcttgtaccggcgggccatcgagcaaatt
tggcgtgcgccggtggcggaatgctatttgtattcgtttgacggcgggtttgttgtggct
gttgagtga
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