Geobacillus thermocatenulatus: GT3921_17075
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Entry
GT3921_17075 CDS
T05178
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
Organism
gtm
Geobacillus thermocatenulatus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Cons_hypoth95
MTS
Methyltransf_11
Methyltransf_15
UPF0020
Methyltransf_32
Methyltransf_12
Ubie_methyltran
YjzC
PrmA
Motif
Other DBs
NCBI-ProteinID:
AST00570
UniProt:
A0A226Q3J5
LinkDB
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Position
complement(3469619..3471022)
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AA seq
467 aa
AA seq
DB search
MRGTDMAKQQTNIKIKKGDQFPVTIQRIGINGEGVGYFQKQVVFVPGALPGEEVIVEATD
IHPTYAEAKIKRIRKRSPNRIKPPCPLYDQCGGCQLQHLSYEAQLEAKRDIVIQALRRHA
RRLDVDKLDIRPTIGMDNPWHYRNKSQFQVGMKEGKVLAGLYGINSHRLVDLSECRIQHP
QTTRVTNIVKTILQDLCIPIYNERTRTGVVRTIVVRVGFRTGDIQLVLVTATKDIPRQQL
LVDEIRRRLPEVKSIVQNINGEKTSLIFGDETEVLAGDEYIQETLGDLSFELSARAFFQL
NPIQTVKLYDEVKKAAALTGTERLVDAYCGVGTIGLWLARDAKEVRGMDTIPEAIEDAQN
NAKKHGFTNTHYVVGKAEYWLPKWVNEGWRPDVIIVDPPRVGCDRALLDTILGVRPKTVV
YVSCNPSSLARDLDALAAQYRVDYIQPVDMFPHTAHVESVARLVLKL
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagagggaccgatatggcaaagcaacaaacgaacatcaaaatcaaaaaaggcgaccaa
tttcccgtgacgattcaacggatcggcattaacggcgaaggggtcggctatttccaaaaa
caagtcgtcttcgtccccggcgcgcttccaggagaggaagtcatcgttgaggcgacggac
atccacccaacctacgccgaggcgaaaatcaagcgcatccgcaagcgctcgccaaaccgc
atcaagccgccatgcccgctctatgaccagtgcggcggctgccagttgcagcacttatcg
tacgaggcgcagctcgaggcgaagcgcgacattgtcatccaggcgctccgccgccatgcc
cggcgcctcgatgtcgacaagcttgacatccgcccgacgatcggcatggacaacccgtgg
cattaccgaaacaaaagccagtttcaagttggaatgaaggaagggaaggtgctcgccggg
ctgtacggcatcaactcccaccggctcgtcgacctatcggaatgccgcatccagcatccg
caaacgacgcgcgtcacgaacatcgtgaaaacaattttgcaggacttgtgcatcccgatt
tacaacgagcggacgagaacaggcgtcgtgcggacgatcgtcgtccgcgtcggcttccgt
acgggcgacattcagcttgtgctggtgacggcgacaaaggacatcccgcgccaacagctg
cttgttgatgaaattcgccgccgcctcccagaagtgaaatcgatcgtgcaaaacatcaac
ggcgaaaaaacgtcgcttattttcggcgacgaaaccgaagtgctcgccggcgacgaatac
attcaagaaacgctcggcgatttgtcgtttgaactgtcggcgcgcgcctttttccagctc
aacccgatccaaacggtcaagctgtacgatgaagtgaaaaaagcggctgccctcaccgga
acggagcggctcgttgacgcctactgcggcgtcggcacgatcgggctgtggctcgcccgc
gatgcgaaagaagtgcgcggcatggacacgatccccgaagcgatcgaagacgcgcaaaac
aacgccaaaaagcatggtttcaccaacacgcactatgtcgtcggcaaagcggaatattgg
ctgcccaaatgggtgaacgaaggctggagaccggatgtcatcatcgtcgacccgccccgc
gtcggctgcgatcgggcgctgcttgacacgatccttggcgtccgtccgaaaacggtcgtc
tacgtctcgtgcaacccatcgagcctcgcccgcgacctcgacgccttggcggcacaatac
cgcgtcgactacatccagccggtcgacatgtttccgcacacggcgcatgtagaaagcgta
gctcgattagtattaaagttgtaa
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