Guillardia theta: GUITHDRAFT_100231
Help
Entry
GUITHDRAFT_100231 CDS
T02925
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
gtt
Guillardia theta
Pathway
gtt03030
DNA replication
gtt03410
Base excision repair
gtt03420
Nucleotide excision repair
gtt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GUITHDRAFT_100231 (RFC1)
03410 Base excision repair
GUITHDRAFT_100231 (RFC1)
03420 Nucleotide excision repair
GUITHDRAFT_100231 (RFC1)
03430 Mismatch repair
GUITHDRAFT_100231 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gtt03032
]
GUITHDRAFT_100231 (RFC1)
03400 DNA repair and recombination proteins [BR:
gtt03400
]
GUITHDRAFT_100231 (RFC1)
DNA replication proteins [BR:
gtt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
GUITHDRAFT_100231 (RFC1)
DNA repair and recombination proteins [BR:
gtt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
GUITHDRAFT_100231 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
nSTAND3
AAA_14
AAA_16
RNA_helicase
PTCB-BRCT
AAA_19
Sigma54_activ_2
RuvB_N
NTPase_1
Gp44_lid
BRCT_2
AAA_7
AAA_18
AAA_11
AAA_5
Motif
Other DBs
NCBI-GeneID:
17310950
NCBI-ProteinID:
XP_005840961
JGI:
Guith1_100231
UniProt:
L1JZG5
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MPQDIRSFFVKNKSSNAPSDNAAEGSNEKQENKDSSPVKPQAKRASEEDQASPQKRKRQS
GKEPKDDGVVTSKYFSQESDKVGNKRKTKGAFEDVTIIEDSEPEKGKKASKKEHPVASEE
PARVASKSPTKAKKEEVAKSPVKAKKEEESSKSTSKAKEEEESSKSTSKAKKEEESSKST
SKAKKEEESSKSTSKAKKEEESSKSTSKAKKEEESSKSTAKAKKEEVSKAPVVTQKEEPK
NSPVKAKTEDKSHSGQGGHVKSTEEVNSKASKPASETQADPPKRKWNWNQQKQDVPNKHL
KEERIDENRGAPNCLSGKTFVITGVLDCLERDEASDLIKGYGGRVTGSVSKKTDFLLCGE
EPGDSKVKKAEELKVPKIDEAGLFQLIKSTATSAPTNEAAKSPEAKVPVTKASPKKSAFT
AKKDTAVKKETDSSVDIKSSSTKSTKTDVSGEGGTSLWVDKHSPAKCEDLVGNGDKRETL
RRWLQNWGKSEAVSGQGRAKKEDADMNKRAVLITGPPGIGKTSTARLVITSLKYDVVEMN
ASDVRNKAGIDEKVSSLTSNHSLSGYFSKSEQSKIGNRRTCLIMDEVDGMSGGDRGGVQE
LINLIKNTRVPIVCIANDYYDKKISSLKNWCLDLRFQKPGKNLVVKRLEQIAREEGFQIK
DRNVFQNALEKLVEGANGDIRHVINSLQTWRMRSNELNFADVAEMQKGGKEQSVVQASIF
DVSTEWFLDSQKRNNATLGDRLDMFFFDADLIPLLVQENYLKTRTSLPPDEVKKNPEFHL
MERMSRAAESISDSDLINSDIRKNQHWSLLPCYGTLATVKAGFPIRGIPPAFYSNELWRK
QSFTKILGHTSTVNKKNRLLSDIQRCMKLKSSANKTDIACDYLGVLRNRLVKPLLDKGQN
GIQDVIDLLDEYYFTKEEFDSICGELRIQDDKVAPDIYGSVDSKVKASLTRGYKQEGHKI
AFVKSSGVKDLASKVKSQPKTLGRSGDMEKEDDEKEESEAEGENDSDTDAPTAASQQKGK
KSKGGSSAAKAPASKSKSARGGKRAT
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaagacatcagaagcttctttgtgaagaacaagagttccaatgcaccctcggac
aatgcggccgaaggttcgaacgagaagcaagaaaacaaggactcgtctcctgtgaagcct
caggcgaagcgggcgtcggaggaggatcaggcctcccctcagaagaggaagcggcagagt
gggaaggaacccaaggacgatggggttgtgacgtccaagtactttagccaggagtctgac
aaggttgggaacaaacgaaagacaaaaggagcgttcgaggatgtcaccattatcgaagac
tctgagcctgaaaaggggaagaaagcttctaagaaggagcaccctgtagccagcgaggag
ccagcaagggttgcttcaaagagtcctactaaggcaaagaaagaggaggttgcgaagagt
ccagtcaaagccaagaaagaggaagagtcatcgaagagcacaagcaaagccaaggaagag
gaagagtcatcgaagagcacaagcaaagctaagaaagaggaagagtcatcgaagagcaca
agcaaagctaagaaagaggaagagtcatcgaagagcacaagcaaagctaagaaagaggaa
gagtcatcgaagagcacaagcaaagctaagaaagaggaagagtcatcgaagagcacagcc
aaagctaagaaagaagaggtttcaaaggccccggtcgtgacccagaaagaagagcccaaa
aacagcccagtgaaggccaagactgaagacaaatctcactccggccagggaggtcatgtg
aaatctacggaggaggtcaacagcaaggcgtcgaagcctgccagtgagactcaagctgat
cctccaaagcgcaagtggaattggaatcaacagaagcaagatgtgcccaacaagcaccta
aaggaagagaggatcgacgagaacagaggggcaccaaattgtttgagtgggaaaacattc
gtaattacgggagtgctggactgtctcgagagagacgaagcgtcggatctcatcaaagga
tatggaggtcgagtgacgggatctgttagcaagaagacagatttcttgttgtgtggagaa
gaaccaggggacagcaaggtgaagaaggcagaagagctgaaagtgcccaagattgacgaa
gcaggcctctttcaactgatcaagtcaacagcgacatcagctccgacgaatgaggcagca
aagagtccagaagccaaggtaccggtgaccaaagcatctccaaagaagagtgctttcacc
gcgaagaaagataccgctgtaaagaaagaaacagactcatctgttgacatcaagtcctcc
tccacgaaatcgacaaaaacagacgtttcaggtgaaggaggaacctcgttgtgggtcgac
aaacacagcccggccaaatgcgaagaccttgtgggaaatggtgacaagcgagaaactttg
cgccgatggctgcaaaactggggaaagtcagaagcagtatcagggcaaggaagagccaag
aaagaagatgctgacatgaataagagggcagtgctcatcacaggccctccgggaatcggc
aagacttccactgcgcgtctggtgatcacttctctcaagtatgacgtcgtcgagatgaac
gcaagtgacgtgaggaacaaggctggcatcgatgagaaggtctcgtcgttgacttccaat
cactccttgtctggctacttctcgaaatcagagcaatcgaagatcggcaaccgaagaacg
tgcttaatcatggacgaagttgatggaatgtcggggggggaccgcggaggcgtgcaggag
ttgatcaacctcatcaagaacactcgagttccaattgtttgtatcgccaacgattactat
gacaagaaaatttcaagtttgaaaaactggtgtttggatctccgatttcagaaacctggc
aagaaccttgtcgtcaagcgtctagaacagattgctcgagaagaggggtttcagatcaaa
gacagaaacgtctttcaaaacgcattagagaaactggttgagggagccaatggagatatt
cggcatgtcatcaactcgctacagacttggaggatgcggtcgaatgagctcaactttgcc
gatgttgctgagatgcaaaagggggggaaggaacagagtgtcgtacaagccagtatcttc
gatgtatcgacagaatggttccttgacagtcaaaaacgaaacaacgcaactctcggcgat
cggctggacatgtttttctttgacgccgatcttatacctctgctggttcaggaaaattat
ctcaagacaagaacctctctgccgccagatgaagtcaagaagaacccggagttccacctc
atggagcgcatgtcacgtgcagcagaatccatcagtgattccgatctcatcaacagtgac
atcagaaaaaaccaacactggagcttactcccttgctacggcacgctggccaccgtcaag
gccgggttccctatcagagggattccgcccgcgttctactccaacgagctgtggaggaaa
caatctttcaccaagattttaggacacacttctactgtcaacaagaagaacaggctcttg
tctgacattcagagatgcatgaagctcaagtcatctgcaaacaagactgacatcgcttgc
gattacttgggcgttctgcgaaatcgactcgtgaaacctcttctcgacaagggccagaac
ggaattcaagatgtgatcgacctcttggacgagtactactttaccaaggaggagttcgac
tcaatctgcggtgagcttcggatccaagacgacaaggttgcgccagacatctacggctcc
gttgatagcaaagtgaaagcttcgcttacaagagggtacaagcaggagggacacaagatc
gcctttgtgaagagctcaggagtgaaagatctcgcctccaaggtcaagtctcagcccaag
acgctgggcaggtcaggggacatggagaaggaggacgacgagaaagaggagagcgaggca
gagggggagaacgattccgacacagatgctccaactgccgcctcgcagcagaaaggaaag
aaatccaaaggaggctcctcagcggcaaaggccccagcaagcaagtccaagtccgcgagg
gggggcaagcgggcgacgtga
DBGET
integrated database retrieval system
