KEGG   Geotalea uraniireducens: Gura_3453
Entry
Gura_3453         CDS       T00521                                 
Name
(GenBank) DNA primase, small subunit
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
gur  Geotalea uraniireducens
Pathway
gur03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:gur00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Gura_3453
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gur03400]
    Gura_3453
Enzymes [BR:gur01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Gura_3453
DNA repair and recombination proteins [BR:gur03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Gura_3453
SSDB
Motif
Pfam: LigD_Prim-Pol DNA_primase_S
Other DBs
NCBI-ProteinID: ABQ27609
UniProt: A5G741
LinkDB
Position
complement(4060818..4061723)
AA seq 301 aa
MSRKVVAIGGRRLSLSNLEKELYPSYGFTKAHVLAYYRRIAPFILPHLQDRALTLKRYPE
GVEDAFFFEKRCPSHHPAWAKTAELRREDGERMTVCLVNDLETLIWVANLASLELHVPLA
RAGSPETPDAMVFDLDPGDEADILDCARVALILRDLLSRLRLASFVKTSGQKGLHVYVPL
NCPETTFEDTKTFSKAVAVILQKNYPDLVTARMAKDYRKAKIFINWSQNDAKATMICVYS
LRAREKPYVSFPLEWRELERLAGLGDPERLQVIHAEAVRRAEEKGDLFREVLVKKQRLPH
L
NT seq 906 nt   +upstreamnt  +downstreamnt
gtgagccggaaagtcgtcgccatcggcgggagaaggctctccctgtcgaacctggaaaag
gagctctacccctcctacggcttcaccaaggcccacgtcctggcgtactatcgccggatc
gcaccgttcatcctcccccatctgcaggaccgggcactgaccttgaaacgctatcccgag
ggggtggaagatgcgttctttttcgagaagcgttgtccttcccatcatccggcctgggcg
aaaacggcagagctccgcagggaagacggagagcggatgacggtctgcctggtcaacgat
ctggaaacgctgatatgggtggcgaaccttgcgtcccttgaactccatgtgcctctcgcc
agggctggttcccctgaaacgcccgatgccatggtcttcgatctggatcccggcgatgag
gctgacatcctggattgcgcccgggtggcgttgatactgcgggacctgctctcccgcttg
cggctggcaagctttgtgaaaacctcgggccagaaaggcctccatgtctatgtccccttg
aactgcccggagacgacctttgaggataccaagactttttcaaaagccgtggcagttatc
cttcagaaaaactatccggacctggtgacagcacgaatggcgaaggattaccggaaggca
aagatctttatcaactggtctcaaaatgatgctaaagcgacgatgatctgtgtgtattcc
ctgcgggcccgggaaaaaccatatgtttcgtttcccctcgaatggcgggaactggagcgg
ctggccgggcttggtgacccggaaaggttgcaggtcatccatgcggaggctgttcgcagg
gccgaagaaaagggtgacctattcagggaggtgctggtgaaaaagcaaaggctgcctcat
ctgtga

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